Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-7A0A075B6B0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-7A0A075B6B0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-7A0A075B6B0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-7A0A075B6B0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-7A0A075B6B0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav6d-7A0A075B6B0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-7A0A075B6B0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav6d-7A0A075B6B0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-7A0A075B6B0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-7A0A075B6B0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-7A0A075B6B0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-7A0A075B6B0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6d-7A0A075B6B0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-7A0A075B6B0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-7A0A075B6B0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav6d-7A0A075B6B0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-7A0A075B6B0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-7A0A075B6B0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav6d-7A0A075B6B0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-7A0A075B6B0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav6d-7A0A075B6B0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav6d-7A0A075B6B0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-7A0A075B6B0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-7A0A075B6B0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-7A0A075B6B0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-7A0A075B6B0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-7A0A075B6B0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-7A0A075B6B0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav6d-7A0A075B6B0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav6d-7A0A075B6B0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav6d-7A0A075B6B0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-7A0A075B6B0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-7A0A075B6B0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-7A0A075B6B0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-7A0A075B6B0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-7A0A075B6B0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.12■□□□□ 0.17
Trav6d-7A0A075B6B0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-7A0A075B6B0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-7A0A075B6B0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-7A0A075B6B0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-7A0A075B6B0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-7A0A075B6B0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav6d-7A0A075B6B0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
Trav6d-7A0A075B6B0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-7A0A075B6B0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav6d-7A0A075B6B0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-7A0A075B6B0 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.1■□□□□ 0.17
Trav6d-7A0A075B6B0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-7A0A075B6B0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-7A0A075B6B0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-7A0A075B6B0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-7A0A075B6B0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-7A0A075B6B0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav6d-7A0A075B6B0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav6d-7A0A075B6B0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-7A0A075B6B0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav6d-7A0A075B6B0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav6d-7A0A075B6B0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6d-7A0A075B6B0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav6d-7A0A075B6B0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-7A0A075B6B0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-7A0A075B6B0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav6d-7A0A075B6B0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav6d-7A0A075B6B0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-7A0A075B6B0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-7A0A075B6B0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-7A0A075B6B0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-7A0A075B6B0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav6d-7A0A075B6B0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-7A0A075B6B0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-7A0A075B6B0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-7A0A075B6B0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav6d-7A0A075B6B0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-7A0A075B6B0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms