Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav13-2A0A075B649 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-2A0A075B649 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-2A0A075B649 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.05□□□□□ -0.16
Trav13-2A0A075B649 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-2A0A075B649 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav13-2A0A075B649 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-2A0A075B649 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Trav13-2A0A075B649 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-2A0A075B649 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.04□□□□□ -0.16
Trav13-2A0A075B649 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-2A0A075B649 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-2A0A075B649 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-2A0A075B649 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-2A0A075B649 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13-2A0A075B649 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13-2A0A075B649 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-2A0A075B649 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-2A0A075B649 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-2A0A075B649 Gm11599-201ENSMUST00000118720 878 ntBASIC14.03□□□□□ -0.16
Trav13-2A0A075B649 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-2A0A075B649 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-2A0A075B649 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-2A0A075B649 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-2A0A075B649 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-2A0A075B649 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav13-2A0A075B649 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-2A0A075B649 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-2A0A075B649 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-2A0A075B649 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-2A0A075B649 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13-2A0A075B649 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Trav13-2A0A075B649 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav13-2A0A075B649 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-2A0A075B649 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-2A0A075B649 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13-2A0A075B649 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-2A0A075B649 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-2A0A075B649 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav13-2A0A075B649 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-2A0A075B649 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-2A0A075B649 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.01□□□□□ -0.17
Trav13-2A0A075B649 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.01□□□□□ -0.17
Trav13-2A0A075B649 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14□□□□□ -0.17
Trav13-2A0A075B649 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14□□□□□ -0.17
Trav13-2A0A075B649 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-2A0A075B649 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-2A0A075B649 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-2A0A075B649 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Trav13-2A0A075B649 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-2A0A075B649 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Trav13-2A0A075B649 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-2A0A075B649 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav13-2A0A075B649 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav13-2A0A075B649 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-2A0A075B649 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-2A0A075B649 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-2A0A075B649 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms