Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-6A0A075B640 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-6A0A075B640 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav7-6A0A075B640 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-6A0A075B640 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav7-6A0A075B640 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav7-6A0A075B640 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav7-6A0A075B640 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-6A0A075B640 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-6A0A075B640 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-6A0A075B640 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-6A0A075B640 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-6A0A075B640 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-6A0A075B640 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-6A0A075B640 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-6A0A075B640 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-6A0A075B640 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-6A0A075B640 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-6A0A075B640 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-6A0A075B640 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-6A0A075B640 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-6A0A075B640 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-6A0A075B640 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav7-6A0A075B640 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-6A0A075B640 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-6A0A075B640 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-6A0A075B640 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav7-6A0A075B640 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-6A0A075B640 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav7-6A0A075B640 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
Trav7-6A0A075B640 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-6A0A075B640 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-6A0A075B640 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-6A0A075B640 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.6□□□□□ -0.07
Trav7-6A0A075B640 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.59□□□□□ -0.07
Trav7-6A0A075B640 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Trav7-6A0A075B640 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-6A0A075B640 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.57□□□□□ -0.08
Trav7-6A0A075B640 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms