Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 AC025884.2-201ENST00000553429 711 ntBASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.75■□□□□ 0.91
PPP1R3EQ9H7J1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP1R3EQ9H7J1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.74■□□□□ 0.91
PPP1R3EQ9H7J1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP1R3EQ9H7J1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP1R3EQ9H7J1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP1R3EQ9H7J1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP1R3EQ9H7J1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.74■□□□□ 0.91
PPP1R3EQ9H7J1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP1R3EQ9H7J1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP1R3EQ9H7J1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPP1R3EQ9H7J1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP1R3EQ9H7J1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PPP1R3EQ9H7J1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP1R3EQ9H7J1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP1R3EQ9H7J1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
PPP1R3EQ9H7J1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP1R3EQ9H7J1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.73■□□□□ 0.91
PPP1R3EQ9H7J1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP1R3EQ9H7J1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPP1R3EQ9H7J1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP1R3EQ9H7J1 GPX1-201ENST00000419349 1106 ntBASIC20.72■□□□□ 0.91
PPP1R3EQ9H7J1 SMPD5-203ENST00000639008 1464 ntBASIC20.72■□□□□ 0.91
PPP1R3EQ9H7J1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PPP1R3EQ9H7J1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.72■□□□□ 0.91
PPP1R3EQ9H7J1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPP1R3EQ9H7J1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP1R3EQ9H7J1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 AC141586.4-201ENST00000624558 1573 ntBASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3EQ9H7J1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PPP1R3EQ9H7J1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.7■□□□□ 0.91
PPP1R3EQ9H7J1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3EQ9H7J1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3EQ9H7J1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.7■□□□□ 0.9
PPP1R3EQ9H7J1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PPP1R3EQ9H7J1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3EQ9H7J1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3EQ9H7J1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3EQ9H7J1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PPP1R3EQ9H7J1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3EQ9H7J1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3EQ9H7J1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP1R3EQ9H7J1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
PPP1R3EQ9H7J1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.69■□□□□ 0.9
PPP1R3EQ9H7J1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.69■□□□□ 0.9
PPP1R3EQ9H7J1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP1R3EQ9H7J1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP1R3EQ9H7J1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 ECEL1P2-201ENST00000461596 1295 ntBASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3EQ9H7J1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP1R3EQ9H7J1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP1R3EQ9H7J1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP1R3EQ9H7J1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP1R3EQ9H7J1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
PPP1R3EQ9H7J1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP1R3EQ9H7J1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PPP1R3EQ9H7J1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP1R3EQ9H7J1 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.66■□□□□ 0.9
PPP1R3EQ9H7J1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PPP1R3EQ9H7J1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP1R3EQ9H7J1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms