Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Vmn1r40Q9EQ46 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r40Q9EQ46 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r40Q9EQ46 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r40Q9EQ46 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r40Q9EQ46 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r40Q9EQ46 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r40Q9EQ46 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.11■□□□□ 0.81
Vmn1r40Q9EQ46 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r40Q9EQ46 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r40Q9EQ46 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r40Q9EQ46 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r40Q9EQ46 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.1■□□□□ 0.81
Vmn1r40Q9EQ46 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r40Q9EQ46 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Vmn1r40Q9EQ46 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r40Q9EQ46 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r40Q9EQ46 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r40Q9EQ46 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r40Q9EQ46 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r40Q9EQ46 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r40Q9EQ46 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vmn1r40Q9EQ46 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r40Q9EQ46 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r40Q9EQ46 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Vmn1r40Q9EQ46 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Vmn1r40Q9EQ46 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r40Q9EQ46 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r40Q9EQ46 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r40Q9EQ46 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r40Q9EQ46 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r40Q9EQ46 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
Vmn1r40Q9EQ46 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r40Q9EQ46 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r40Q9EQ46 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r40Q9EQ46 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r40Q9EQ46 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.05■□□□□ 0.8
Vmn1r40Q9EQ46 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Vmn1r40Q9EQ46 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r40Q9EQ46 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.05■□□□□ 0.8
Vmn1r40Q9EQ46 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r40Q9EQ46 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Vmn1r40Q9EQ46 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Vmn1r40Q9EQ46 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r40Q9EQ46 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r40Q9EQ46 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r40Q9EQ46 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Vmn1r40Q9EQ46 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r40Q9EQ46 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.04■□□□□ 0.8
Vmn1r40Q9EQ46 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r40Q9EQ46 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r40Q9EQ46 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r40Q9EQ46 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r40Q9EQ46 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.03■□□□□ 0.8
Vmn1r40Q9EQ46 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r40Q9EQ46 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r40Q9EQ46 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r40Q9EQ46 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Vmn1r40Q9EQ46 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r40Q9EQ46 Gm9847-201ENSMUST00000052528 599 ntBASIC20.02■□□□□ 0.8
Vmn1r40Q9EQ46 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Vmn1r40Q9EQ46 Gm13241-201ENSMUST00000094493 780 ntBASIC20.02■□□□□ 0.8
Vmn1r40Q9EQ46 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r40Q9EQ46 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r40Q9EQ46 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.02■□□□□ 0.79
Vmn1r40Q9EQ46 Gm12922-201ENSMUST00000120626 809 ntBASIC20.01■□□□□ 0.79
Vmn1r40Q9EQ46 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r40Q9EQ46 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r40Q9EQ46 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r40Q9EQ46 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r40Q9EQ46 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r40Q9EQ46 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Vmn1r40Q9EQ46 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r40Q9EQ46 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r40Q9EQ46 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20■□□□□ 0.79
Vmn1r40Q9EQ46 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r40Q9EQ46 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r40Q9EQ46 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r40Q9EQ46 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r40Q9EQ46 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.99■□□□□ 0.79
Vmn1r40Q9EQ46 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.99■□□□□ 0.79
Vmn1r40Q9EQ46 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r40Q9EQ46 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.99■□□□□ 0.79
Vmn1r40Q9EQ46 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Vmn1r40Q9EQ46 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Vmn1r40Q9EQ46 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vmn1r40Q9EQ46 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vmn1r40Q9EQ46 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.98■□□□□ 0.79
Vmn1r40Q9EQ46 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.98■□□□□ 0.79
Vmn1r40Q9EQ46 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms