Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USB1Q9BQ65 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USB1Q9BQ65 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USB1Q9BQ65 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.74■□□□□ 0.91
USB1Q9BQ65 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.74■□□□□ 0.91
USB1Q9BQ65 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USB1Q9BQ65 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USB1Q9BQ65 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.74■□□□□ 0.91
USB1Q9BQ65 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USB1Q9BQ65 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
USB1Q9BQ65 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.73■□□□□ 0.91
USB1Q9BQ65 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USB1Q9BQ65 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.73■□□□□ 0.91
USB1Q9BQ65 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
USB1Q9BQ65 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.73■□□□□ 0.91
USB1Q9BQ65 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USB1Q9BQ65 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USB1Q9BQ65 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USB1Q9BQ65 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.72■□□□□ 0.91
USB1Q9BQ65 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USB1Q9BQ65 BX664725.1-201ENST00000438252 379 ntBASIC20.72■□□□□ 0.91
USB1Q9BQ65 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.72■□□□□ 0.91
USB1Q9BQ65 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.72■□□□□ 0.91
USB1Q9BQ65 AC091060.1-201ENST00000623524 1766 ntBASIC20.72■□□□□ 0.91
USB1Q9BQ65 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USB1Q9BQ65 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
USB1Q9BQ65 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
USB1Q9BQ65 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USB1Q9BQ65 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.71■□□□□ 0.91
USB1Q9BQ65 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
USB1Q9BQ65 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
USB1Q9BQ65 KRT125P-201ENST00000546827 989 ntBASIC20.71■□□□□ 0.91
USB1Q9BQ65 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.71■□□□□ 0.91
USB1Q9BQ65 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.71■□□□□ 0.91
USB1Q9BQ65 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
USB1Q9BQ65 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.71■□□□□ 0.91
USB1Q9BQ65 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USB1Q9BQ65 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USB1Q9BQ65 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.7■□□□□ 0.9
USB1Q9BQ65 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USB1Q9BQ65 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.7■□□□□ 0.9
USB1Q9BQ65 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USB1Q9BQ65 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USB1Q9BQ65 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USB1Q9BQ65 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USB1Q9BQ65 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USB1Q9BQ65 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USB1Q9BQ65 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USB1Q9BQ65 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USB1Q9BQ65 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USB1Q9BQ65 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
USB1Q9BQ65 AC120024.1-201ENST00000562672 995 ntBASIC20.69■□□□□ 0.9
USB1Q9BQ65 AC137630.3-201ENST00000607245 391 ntBASIC20.69■□□□□ 0.9
USB1Q9BQ65 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USB1Q9BQ65 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USB1Q9BQ65 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USB1Q9BQ65 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USB1Q9BQ65 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.69■□□□□ 0.9
USB1Q9BQ65 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USB1Q9BQ65 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
USB1Q9BQ65 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USB1Q9BQ65 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USB1Q9BQ65 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USB1Q9BQ65 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USB1Q9BQ65 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.68■□□□□ 0.9
USB1Q9BQ65 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.68■□□□□ 0.9
USB1Q9BQ65 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USB1Q9BQ65 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.68■□□□□ 0.9
USB1Q9BQ65 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USB1Q9BQ65 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USB1Q9BQ65 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USB1Q9BQ65 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USB1Q9BQ65 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
USB1Q9BQ65 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USB1Q9BQ65 GUSBP5-201ENST00000418136 578 ntBASIC20.67■□□□□ 0.9
USB1Q9BQ65 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.67■□□□□ 0.9
USB1Q9BQ65 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
USB1Q9BQ65 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
USB1Q9BQ65 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.67■□□□□ 0.9
USB1Q9BQ65 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
USB1Q9BQ65 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.67■□□□□ 0.9
USB1Q9BQ65 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USB1Q9BQ65 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
USB1Q9BQ65 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USB1Q9BQ65 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USB1Q9BQ65 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
USB1Q9BQ65 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USB1Q9BQ65 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.66■□□□□ 0.9
USB1Q9BQ65 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.66■□□□□ 0.9
USB1Q9BQ65 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USB1Q9BQ65 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.65■□□□□ 0.9
USB1Q9BQ65 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USB1Q9BQ65 AC097639.1-201ENST00000565519 1891 ntBASIC20.65■□□□□ 0.9
USB1Q9BQ65 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USB1Q9BQ65 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USB1Q9BQ65 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USB1Q9BQ65 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USB1Q9BQ65 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USB1Q9BQ65 AC239859.2-201ENST00000444165 318 ntBASIC20.65■□□□□ 0.9
USB1Q9BQ65 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms