Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scrt1Q99M85 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scrt1Q99M85 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scrt1Q99M85 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scrt1Q99M85 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.52■□□□□ 0.56
Scrt1Q99M85 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.52■□□□□ 0.56
Scrt1Q99M85 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scrt1Q99M85 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scrt1Q99M85 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scrt1Q99M85 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Gm12922-201ENSMUST00000120626 809 ntBASIC18.51■□□□□ 0.55
Scrt1Q99M85 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scrt1Q99M85 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scrt1Q99M85 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scrt1Q99M85 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scrt1Q99M85 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scrt1Q99M85 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scrt1Q99M85 Gm12821-201ENSMUST00000120022 600 ntBASIC18.5■□□□□ 0.55
Scrt1Q99M85 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.5■□□□□ 0.55
Scrt1Q99M85 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scrt1Q99M85 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Scrt1Q99M85 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scrt1Q99M85 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Scrt1Q99M85 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.49■□□□□ 0.55
Scrt1Q99M85 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.49■□□□□ 0.55
Scrt1Q99M85 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scrt1Q99M85 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scrt1Q99M85 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scrt1Q99M85 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.49■□□□□ 0.55
Scrt1Q99M85 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scrt1Q99M85 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scrt1Q99M85 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scrt1Q99M85 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scrt1Q99M85 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scrt1Q99M85 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scrt1Q99M85 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scrt1Q99M85 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scrt1Q99M85 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scrt1Q99M85 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scrt1Q99M85 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scrt1Q99M85 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scrt1Q99M85 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.46■□□□□ 0.55
Scrt1Q99M85 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Scrt1Q99M85 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.46■□□□□ 0.55
Scrt1Q99M85 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scrt1Q99M85 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Scrt1Q99M85 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scrt1Q99M85 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scrt1Q99M85 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scrt1Q99M85 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scrt1Q99M85 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scrt1Q99M85 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Scrt1Q99M85 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scrt1Q99M85 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scrt1Q99M85 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scrt1Q99M85 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scrt1Q99M85 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scrt1Q99M85 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scrt1Q99M85 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scrt1Q99M85 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Scrt1Q99M85 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scrt1Q99M85 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scrt1Q99M85 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scrt1Q99M85 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scrt1Q99M85 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scrt1Q99M85 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scrt1Q99M85 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scrt1Q99M85 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scrt1Q99M85 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scrt1Q99M85 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scrt1Q99M85 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Scrt1Q99M85 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Scrt1Q99M85 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scrt1Q99M85 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scrt1Q99M85 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Scrt1Q99M85 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.42■□□□□ 0.54
Scrt1Q99M85 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scrt1Q99M85 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scrt1Q99M85 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scrt1Q99M85 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms