Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nck1Q99M51 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nck1Q99M51 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nck1Q99M51 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nck1Q99M51 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.14■□□□□ 0.81
Nck1Q99M51 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nck1Q99M51 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nck1Q99M51 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Nck1Q99M51 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nck1Q99M51 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nck1Q99M51 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.14■□□□□ 0.81
Nck1Q99M51 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nck1Q99M51 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Nck1Q99M51 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.13■□□□□ 0.81
Nck1Q99M51 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nck1Q99M51 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nck1Q99M51 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nck1Q99M51 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nck1Q99M51 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nck1Q99M51 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nck1Q99M51 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Nck1Q99M51 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nck1Q99M51 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.11■□□□□ 0.81
Nck1Q99M51 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Nck1Q99M51 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nck1Q99M51 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nck1Q99M51 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nck1Q99M51 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Nck1Q99M51 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nck1Q99M51 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nck1Q99M51 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nck1Q99M51 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nck1Q99M51 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nck1Q99M51 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nck1Q99M51 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nck1Q99M51 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.09■□□□□ 0.81
Nck1Q99M51 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nck1Q99M51 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nck1Q99M51 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nck1Q99M51 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.08■□□□□ 0.81
Nck1Q99M51 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nck1Q99M51 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nck1Q99M51 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Nck1Q99M51 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nck1Q99M51 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nck1Q99M51 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nck1Q99M51 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nck1Q99M51 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nck1Q99M51 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nck1Q99M51 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nck1Q99M51 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nck1Q99M51 Gm44428-201ENSMUST00000204474 874 ntBASIC20.07■□□□□ 0.8
Nck1Q99M51 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.07■□□□□ 0.8
Nck1Q99M51 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.06■□□□□ 0.8
Nck1Q99M51 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Nck1Q99M51 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nck1Q99M51 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nck1Q99M51 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nck1Q99M51 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Nck1Q99M51 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nck1Q99M51 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nck1Q99M51 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nck1Q99M51 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nck1Q99M51 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nck1Q99M51 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
Nck1Q99M51 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nck1Q99M51 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.05■□□□□ 0.8
Nck1Q99M51 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Nck1Q99M51 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nck1Q99M51 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nck1Q99M51 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nck1Q99M51 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nck1Q99M51 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nck1Q99M51 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nck1Q99M51 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nck1Q99M51 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nck1Q99M51 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nck1Q99M51 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nck1Q99M51 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nck1Q99M51 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nck1Q99M51 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nck1Q99M51 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nck1Q99M51 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nck1Q99M51 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nck1Q99M51 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nck1Q99M51 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nck1Q99M51 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nck1Q99M51 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nck1Q99M51 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.02■□□□□ 0.8
Nck1Q99M51 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.02■□□□□ 0.8
Nck1Q99M51 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nck1Q99M51 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nck1Q99M51 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Nck1Q99M51 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nck1Q99M51 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nck1Q99M51 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nck1Q99M51 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nck1Q99M51 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nck1Q99M51 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nck1Q99M51 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms