Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
MS4A4EQ96PG1 AC093323.1-202ENST00000635031 2045 ntBASIC21.89■■□□□ 1.1
MS4A4EQ96PG1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A4EQ96PG1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.89■■□□□ 1.09
MS4A4EQ96PG1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A4EQ96PG1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A4EQ96PG1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.89■■□□□ 1.09
MS4A4EQ96PG1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.88■■□□□ 1.09
MS4A4EQ96PG1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A4EQ96PG1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.88■■□□□ 1.09
MS4A4EQ96PG1 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.88■■□□□ 1.09
MS4A4EQ96PG1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.88■■□□□ 1.09
MS4A4EQ96PG1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A4EQ96PG1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A4EQ96PG1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A4EQ96PG1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.88■■□□□ 1.09
MS4A4EQ96PG1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MS4A4EQ96PG1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MS4A4EQ96PG1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
MS4A4EQ96PG1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MS4A4EQ96PG1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MS4A4EQ96PG1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 LINC01124-201ENST00000409786 2117 ntBASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 AL592295.1-201ENST00000400984 884 ntBASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MS4A4EQ96PG1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MS4A4EQ96PG1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MS4A4EQ96PG1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MS4A4EQ96PG1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MS4A4EQ96PG1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MS4A4EQ96PG1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MS4A4EQ96PG1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MS4A4EQ96PG1 LONRF2P2-201ENST00000439212 571 ntBASIC21.84■■□□□ 1.09
MS4A4EQ96PG1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
MS4A4EQ96PG1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MS4A4EQ96PG1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MS4A4EQ96PG1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MS4A4EQ96PG1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MS4A4EQ96PG1 DUX4L18-201ENST00000553347 1267 ntBASIC21.83■■□□□ 1.09
MS4A4EQ96PG1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.83■■□□□ 1.09
MS4A4EQ96PG1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MS4A4EQ96PG1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
MS4A4EQ96PG1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.82■■□□□ 1.08
MS4A4EQ96PG1 AC139795.1-202ENST00000500444 432 ntBASIC21.82■■□□□ 1.08
MS4A4EQ96PG1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MS4A4EQ96PG1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MS4A4EQ96PG1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MS4A4EQ96PG1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MS4A4EQ96PG1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MS4A4EQ96PG1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.81■■□□□ 1.08
MS4A4EQ96PG1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MS4A4EQ96PG1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MS4A4EQ96PG1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
MS4A4EQ96PG1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MS4A4EQ96PG1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
MS4A4EQ96PG1 ATP5G2P3-201ENST00000429083 425 ntBASIC21.8■■□□□ 1.08
MS4A4EQ96PG1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.8■■□□□ 1.08
MS4A4EQ96PG1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MS4A4EQ96PG1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.8■■□□□ 1.08
MS4A4EQ96PG1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MS4A4EQ96PG1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.8■■□□□ 1.08
MS4A4EQ96PG1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MS4A4EQ96PG1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A4EQ96PG1 AC141586.4-201ENST00000624558 1573 ntBASIC21.79■■□□□ 1.08
MS4A4EQ96PG1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A4EQ96PG1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A4EQ96PG1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A4EQ96PG1 AC004987.1-201ENST00000428627 508 ntBASIC21.79■■□□□ 1.08
MS4A4EQ96PG1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
MS4A4EQ96PG1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
MS4A4EQ96PG1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.79■■□□□ 1.08
MS4A4EQ96PG1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A4EQ96PG1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A4EQ96PG1 LINC00543-201ENST00000567234 1845 ntBASIC21.78■■□□□ 1.08
MS4A4EQ96PG1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A4EQ96PG1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A4EQ96PG1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms