Protein–RNA interactions for Protein: Q96LT9

RNPC3, RNA-binding protein 40, humanhuman

Known RBP Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3Q96LT9 MTDHP2-201ENST00000601468 714 ntBASIC26.3■■□□□ 1.8
RNPC3Q96LT9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNPC3Q96LT9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.3■■□□□ 1.8
RNPC3Q96LT9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNPC3Q96LT9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNPC3Q96LT9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.29■■□□□ 1.8
RNPC3Q96LT9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNPC3Q96LT9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.29■■□□□ 1.8
RNPC3Q96LT9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNPC3Q96LT9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNPC3Q96LT9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RNPC3Q96LT9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNPC3Q96LT9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RNPC3Q96LT9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RNPC3Q96LT9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.27■■□□□ 1.8
RNPC3Q96LT9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.27■■□□□ 1.8
RNPC3Q96LT9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNPC3Q96LT9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RNPC3Q96LT9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNPC3Q96LT9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RNPC3Q96LT9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RNPC3Q96LT9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNPC3Q96LT9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNPC3Q96LT9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
RNPC3Q96LT9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNPC3Q96LT9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.25■■□□□ 1.79
RNPC3Q96LT9 AC104564.3-201ENST00000582367 638 ntBASIC26.25■■□□□ 1.79
RNPC3Q96LT9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RNPC3Q96LT9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNPC3Q96LT9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNPC3Q96LT9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.24■■□□□ 1.79
RNPC3Q96LT9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.24■■□□□ 1.79
RNPC3Q96LT9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.24■■□□□ 1.79
RNPC3Q96LT9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNPC3Q96LT9 MIR4281-201ENST00000580852 62 ntBASIC26.24■■□□□ 1.79
RNPC3Q96LT9 AC091060.1-201ENST00000623524 1766 ntBASIC26.24■■□□□ 1.79
RNPC3Q96LT9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNPC3Q96LT9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RNPC3Q96LT9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.23■■□□□ 1.79
RNPC3Q96LT9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
RNPC3Q96LT9 AC026271.2-201ENST00000428091 497 ntBASIC26.22■■□□□ 1.79
RNPC3Q96LT9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.22■■□□□ 1.79
RNPC3Q96LT9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.22■■□□□ 1.79
RNPC3Q96LT9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
RNPC3Q96LT9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNPC3Q96LT9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.22■■□□□ 1.79
RNPC3Q96LT9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RNPC3Q96LT9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNPC3Q96LT9 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.21■■□□□ 1.79
RNPC3Q96LT9 AC142381.2-201ENST00000566120 298 ntBASIC26.21■■□□□ 1.79
RNPC3Q96LT9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.21■■□□□ 1.79
RNPC3Q96LT9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNPC3Q96LT9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.2■■□□□ 1.79
RNPC3Q96LT9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.2■■□□□ 1.79
RNPC3Q96LT9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNPC3Q96LT9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNPC3Q96LT9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNPC3Q96LT9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RNPC3Q96LT9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RNPC3Q96LT9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.19■■□□□ 1.78
RNPC3Q96LT9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.19■■□□□ 1.78
RNPC3Q96LT9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.18■■□□□ 1.78
RNPC3Q96LT9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNPC3Q96LT9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
RNPC3Q96LT9 MIR5787-201ENST00000611784 55 ntBASIC26.18■■□□□ 1.78
RNPC3Q96LT9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNPC3Q96LT9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RNPC3Q96LT9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RNPC3Q96LT9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
RNPC3Q96LT9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.17■■□□□ 1.78
RNPC3Q96LT9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.17■■□□□ 1.78
RNPC3Q96LT9 PBX2P1-201ENST00000493219 1291 ntBASIC26.17■■□□□ 1.78
RNPC3Q96LT9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.17■■□□□ 1.78
RNPC3Q96LT9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RNPC3Q96LT9 AL512631.2-201ENST00000604634 923 ntBASIC26.17■■□□□ 1.78
RNPC3Q96LT9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.17■■□□□ 1.78
RNPC3Q96LT9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNPC3Q96LT9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
RNPC3Q96LT9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
RNPC3Q96LT9 AC106739.1-201ENST00000617035 715 ntBASIC26.16■■□□□ 1.78
RNPC3Q96LT9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNPC3Q96LT9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.15■■□□□ 1.78
RNPC3Q96LT9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.15■■□□□ 1.78
RNPC3Q96LT9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNPC3Q96LT9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNPC3Q96LT9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RNPC3Q96LT9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.15■■□□□ 1.78
RNPC3Q96LT9 AC135279.3-201ENST00000610945 1311 ntBASIC26.14■■□□□ 1.78
RNPC3Q96LT9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNPC3Q96LT9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.14■■□□□ 1.78
RNPC3Q96LT9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.14■■□□□ 1.78
RNPC3Q96LT9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNPC3Q96LT9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RNPC3Q96LT9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RNPC3Q96LT9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNPC3Q96LT9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNPC3Q96LT9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.13■■□□□ 1.77
RNPC3Q96LT9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.12■■□□□ 1.77
RNPC3Q96LT9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
RNPC3Q96LT9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms