Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Col20a1Q923P0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col20a1Q923P0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col20a1Q923P0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Col20a1Q923P0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Col20a1Q923P0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Col20a1Q923P0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Col20a1Q923P0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Col20a1Q923P0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Col20a1Q923P0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col20a1Q923P0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col20a1Q923P0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col20a1Q923P0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Col20a1Q923P0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Col20a1Q923P0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.18■■□□□ 1.62
Col20a1Q923P0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC25.18■■□□□ 1.62
Col20a1Q923P0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col20a1Q923P0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.18■■□□□ 1.62
Col20a1Q923P0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col20a1Q923P0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col20a1Q923P0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Col20a1Q923P0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC25.17■■□□□ 1.62
Col20a1Q923P0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Col20a1Q923P0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC25.17■■□□□ 1.62
Col20a1Q923P0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Col20a1Q923P0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Col20a1Q923P0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Col20a1Q923P0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
Col20a1Q923P0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Col20a1Q923P0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Col20a1Q923P0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Col20a1Q923P0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Col20a1Q923P0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC25.15■■□□□ 1.62
Col20a1Q923P0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Col20a1Q923P0 Gm13241-201ENSMUST00000094493 780 ntBASIC25.15■■□□□ 1.62
Col20a1Q923P0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Col20a1Q923P0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Col20a1Q923P0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Col20a1Q923P0 Gm9847-201ENSMUST00000052528 599 ntBASIC25.14■■□□□ 1.62
Col20a1Q923P0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC25.14■■□□□ 1.62
Col20a1Q923P0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Col20a1Q923P0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Col20a1Q923P0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Col20a1Q923P0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Col20a1Q923P0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Col20a1Q923P0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Col20a1Q923P0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Col20a1Q923P0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Col20a1Q923P0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Col20a1Q923P0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Col20a1Q923P0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Col20a1Q923P0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Col20a1Q923P0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Col20a1Q923P0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Col20a1Q923P0 Gm15039-201ENSMUST00000118914 875 ntBASIC25.12■■□□□ 1.61
Col20a1Q923P0 Gm12922-201ENSMUST00000120626 809 ntBASIC25.12■■□□□ 1.61
Col20a1Q923P0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC25.12■■□□□ 1.61
Col20a1Q923P0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col20a1Q923P0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col20a1Q923P0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col20a1Q923P0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC25.12■■□□□ 1.61
Col20a1Q923P0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.11■■□□□ 1.61
Col20a1Q923P0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Col20a1Q923P0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC25.11■■□□□ 1.61
Col20a1Q923P0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Col20a1Q923P0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Col20a1Q923P0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Col20a1Q923P0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Col20a1Q923P0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.09■■□□□ 1.61
Col20a1Q923P0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.09■■□□□ 1.61
Col20a1Q923P0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Col20a1Q923P0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.08■■□□□ 1.6
Col20a1Q923P0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Col20a1Q923P0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC25.07■■□□□ 1.6
Col20a1Q923P0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Col20a1Q923P0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Col20a1Q923P0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.07■■□□□ 1.6
Col20a1Q923P0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Col20a1Q923P0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Col20a1Q923P0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Col20a1Q923P0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Col20a1Q923P0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Col20a1Q923P0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Col20a1Q923P0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Col20a1Q923P0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.06■■□□□ 1.6
Col20a1Q923P0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Col20a1Q923P0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Col20a1Q923P0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.06■■□□□ 1.6
Col20a1Q923P0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col20a1Q923P0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col20a1Q923P0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col20a1Q923P0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col20a1Q923P0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col20a1Q923P0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col20a1Q923P0 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.05■■□□□ 1.6
Col20a1Q923P0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col20a1Q923P0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col20a1Q923P0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col20a1Q923P0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC25.04■■□□□ 1.6
Col20a1Q923P0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms