Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.47■■□□□ 1.19
Pcdhb2Q91Y00 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb2Q91Y00 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb2Q91Y00 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Rps24-207ENSMUST00000224568 714 ntBASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb2Q91Y00 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdhb2Q91Y00 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdhb2Q91Y00 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdhb2Q91Y00 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb2Q91Y00 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.44■■□□□ 1.18
Pcdhb2Q91Y00 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.44■■□□□ 1.18
Pcdhb2Q91Y00 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.44■■□□□ 1.18
Pcdhb2Q91Y00 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb2Q91Y00 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb2Q91Y00 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Pcdhb2Q91Y00 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb2Q91Y00 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb2Q91Y00 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb2Q91Y00 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb2Q91Y00 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb2Q91Y00 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb2Q91Y00 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb2Q91Y00 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb2Q91Y00 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb2Q91Y00 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb2Q91Y00 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb2Q91Y00 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Pcdhb2Q91Y00 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb2Q91Y00 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb2Q91Y00 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb2Q91Y00 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.41■■□□□ 1.18
Pcdhb2Q91Y00 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhb2Q91Y00 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb2Q91Y00 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb2Q91Y00 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb2Q91Y00 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.41■■□□□ 1.18
Pcdhb2Q91Y00 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb2Q91Y00 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcdhb2Q91Y00 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb2Q91Y00 Etf1-202ENSMUST00000180351 108 ntBASIC22.4■■□□□ 1.18
Pcdhb2Q91Y00 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.4■■□□□ 1.18
Pcdhb2Q91Y00 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb2Q91Y00 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb2Q91Y00 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.39■■□□□ 1.18
Pcdhb2Q91Y00 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb2Q91Y00 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb2Q91Y00 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Pcdhb2Q91Y00 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Pcdhb2Q91Y00 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb2Q91Y00 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Pcdhb2Q91Y00 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Gm9959-201ENSMUST00000068277 390 ntBASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb2Q91Y00 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb2Q91Y00 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb2Q91Y00 Gm10399-202ENSMUST00000202768 748 ntBASIC22.37■■□□□ 1.17
Pcdhb2Q91Y00 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhb2Q91Y00 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb2Q91Y00 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb2Q91Y00 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Gm45102-201ENSMUST00000207427 857 ntBASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms