Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.48■□□□□ 0.55
Cspg4Q8VHY0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Cspg4Q8VHY0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.47■□□□□ 0.55
Cspg4Q8VHY0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg4Q8VHY0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg4Q8VHY0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg4Q8VHY0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg4Q8VHY0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg4Q8VHY0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg4Q8VHY0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg4Q8VHY0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg4Q8VHY0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg4Q8VHY0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg4Q8VHY0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cspg4Q8VHY0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.45■□□□□ 0.54
Cspg4Q8VHY0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg4Q8VHY0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg4Q8VHY0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg4Q8VHY0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.45■□□□□ 0.54
Cspg4Q8VHY0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
Cspg4Q8VHY0 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.45■□□□□ 0.54
Cspg4Q8VHY0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.45■□□□□ 0.54
Cspg4Q8VHY0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg4Q8VHY0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg4Q8VHY0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg4Q8VHY0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.44■□□□□ 0.54
Cspg4Q8VHY0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.44■□□□□ 0.54
Cspg4Q8VHY0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cspg4Q8VHY0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.44■□□□□ 0.54
Cspg4Q8VHY0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg4Q8VHY0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg4Q8VHY0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.44■□□□□ 0.54
Cspg4Q8VHY0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cspg4Q8VHY0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cspg4Q8VHY0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.43■□□□□ 0.54
Cspg4Q8VHY0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cspg4Q8VHY0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cspg4Q8VHY0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.43■□□□□ 0.54
Cspg4Q8VHY0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cspg4Q8VHY0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cspg4Q8VHY0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cspg4Q8VHY0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cspg4Q8VHY0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cspg4Q8VHY0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cspg4Q8VHY0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cspg4Q8VHY0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cspg4Q8VHY0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cspg4Q8VHY0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Cspg4Q8VHY0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cspg4Q8VHY0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.41■□□□□ 0.54
Cspg4Q8VHY0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cspg4Q8VHY0 Gm37179-201ENSMUST00000194862 823 ntBASIC18.41■□□□□ 0.54
Cspg4Q8VHY0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cspg4Q8VHY0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cspg4Q8VHY0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cspg4Q8VHY0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cspg4Q8VHY0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cspg4Q8VHY0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cspg4Q8VHY0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cspg4Q8VHY0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cspg4Q8VHY0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cspg4Q8VHY0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cspg4Q8VHY0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.39■□□□□ 0.53
Cspg4Q8VHY0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.39■□□□□ 0.53
Cspg4Q8VHY0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cspg4Q8VHY0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.39■□□□□ 0.53
Cspg4Q8VHY0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cspg4Q8VHY0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cspg4Q8VHY0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cspg4Q8VHY0 Gm22325-201ENSMUST00000158904 308 ntBASIC18.38■□□□□ 0.53
Cspg4Q8VHY0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cspg4Q8VHY0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cspg4Q8VHY0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cspg4Q8VHY0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cspg4Q8VHY0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Cspg4Q8VHY0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cspg4Q8VHY0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cspg4Q8VHY0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg4Q8VHY0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg4Q8VHY0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg4Q8VHY0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.37■□□□□ 0.53
Cspg4Q8VHY0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cspg4Q8VHY0 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.36■□□□□ 0.53
Cspg4Q8VHY0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.36■□□□□ 0.53
Cspg4Q8VHY0 Gm43137-201ENSMUST00000198052 594 ntBASIC18.36■□□□□ 0.53
Cspg4Q8VHY0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg4Q8VHY0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.36■□□□□ 0.53
Cspg4Q8VHY0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg4Q8VHY0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg4Q8VHY0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cspg4Q8VHY0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg4Q8VHY0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg4Q8VHY0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cspg4Q8VHY0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg4Q8VHY0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg4Q8VHY0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg4Q8VHY0 Mir7075-201ENSMUST00000184187 82 ntBASIC18.35■□□□□ 0.53
Cspg4Q8VHY0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg4Q8VHY0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms