Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc28bQ8CEG5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc28bQ8CEG5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc28bQ8CEG5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc28bQ8CEG5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc28bQ8CEG5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc28bQ8CEG5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc28bQ8CEG5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc28bQ8CEG5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc28bQ8CEG5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ccdc28bQ8CEG5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc28bQ8CEG5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc28bQ8CEG5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28bQ8CEG5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28bQ8CEG5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28bQ8CEG5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc28bQ8CEG5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28bQ8CEG5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28bQ8CEG5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28bQ8CEG5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc28bQ8CEG5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28bQ8CEG5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc28bQ8CEG5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc28bQ8CEG5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc28bQ8CEG5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28bQ8CEG5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28bQ8CEG5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28bQ8CEG5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28bQ8CEG5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28bQ8CEG5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc28bQ8CEG5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc28bQ8CEG5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.83■□□□□ 0.93
Ccdc28bQ8CEG5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc28bQ8CEG5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc28bQ8CEG5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc28bQ8CEG5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc28bQ8CEG5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc28bQ8CEG5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28bQ8CEG5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28bQ8CEG5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc28bQ8CEG5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28bQ8CEG5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28bQ8CEG5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ccdc28bQ8CEG5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28bQ8CEG5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28bQ8CEG5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28bQ8CEG5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28bQ8CEG5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28bQ8CEG5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc28bQ8CEG5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc28bQ8CEG5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc28bQ8CEG5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc28bQ8CEG5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Ccdc28bQ8CEG5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc28bQ8CEG5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc28bQ8CEG5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc28bQ8CEG5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc28bQ8CEG5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28bQ8CEG5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28bQ8CEG5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28bQ8CEG5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28bQ8CEG5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28bQ8CEG5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28bQ8CEG5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28bQ8CEG5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28bQ8CEG5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28bQ8CEG5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28bQ8CEG5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc28bQ8CEG5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28bQ8CEG5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28bQ8CEG5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28bQ8CEG5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28bQ8CEG5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc28bQ8CEG5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc28bQ8CEG5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc28bQ8CEG5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.76■□□□□ 0.91
Ccdc28bQ8CEG5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc28bQ8CEG5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ccdc28bQ8CEG5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc28bQ8CEG5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28bQ8CEG5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28bQ8CEG5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28bQ8CEG5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28bQ8CEG5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28bQ8CEG5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28bQ8CEG5 Gm7432-201ENSMUST00000210343 879 ntBASIC20.75■□□□□ 0.91
Ccdc28bQ8CEG5 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.75■□□□□ 0.91
Ccdc28bQ8CEG5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms