Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Fam78aQ8C552 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Fam78aQ8C552 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Fam78aQ8C552 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Fam78aQ8C552 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.71■■□□□ 1.23
Fam78aQ8C552 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Fam78aQ8C552 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Fam78aQ8C552 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.7■■□□□ 1.22
Fam78aQ8C552 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Fam78aQ8C552 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Fam78aQ8C552 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Fam78aQ8C552 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Fam78aQ8C552 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Fam78aQ8C552 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Fam78aQ8C552 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Fam78aQ8C552 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Fam78aQ8C552 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Fam78aQ8C552 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Fam78aQ8C552 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Fam78aQ8C552 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Fam78aQ8C552 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Fam78aQ8C552 Gm27454-201ENSMUST00000185090 204 ntBASIC22.68■■□□□ 1.22
Fam78aQ8C552 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
Fam78aQ8C552 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Fam78aQ8C552 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Fam78aQ8C552 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Fam78aQ8C552 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Fam78aQ8C552 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Fam78aQ8C552 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Fam78aQ8C552 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Fam78aQ8C552 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Fam78aQ8C552 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Fam78aQ8C552 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Fam78aQ8C552 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Fam78aQ8C552 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.66■■□□□ 1.22
Fam78aQ8C552 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Fam78aQ8C552 Gm12821-201ENSMUST00000120022 600 ntBASIC22.66■■□□□ 1.22
Fam78aQ8C552 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.66■■□□□ 1.22
Fam78aQ8C552 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Fam78aQ8C552 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Fam78aQ8C552 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Fam78aQ8C552 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.65■■□□□ 1.22
Fam78aQ8C552 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Fam78aQ8C552 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Fam78aQ8C552 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Fam78aQ8C552 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Fam78aQ8C552 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Fam78aQ8C552 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Fam78aQ8C552 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Fam78aQ8C552 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.64■■□□□ 1.21
Fam78aQ8C552 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Fam78aQ8C552 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.63■■□□□ 1.21
Fam78aQ8C552 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.63■■□□□ 1.21
Fam78aQ8C552 Gm45417-201ENSMUST00000209533 758 ntBASIC22.63■■□□□ 1.21
Fam78aQ8C552 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Fam78aQ8C552 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.63■■□□□ 1.21
Fam78aQ8C552 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Fam78aQ8C552 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Fam78aQ8C552 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Fam78aQ8C552 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Fam78aQ8C552 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Fam78aQ8C552 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Fam78aQ8C552 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Fam78aQ8C552 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Fam78aQ8C552 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Fam78aQ8C552 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.61■■□□□ 1.21
Fam78aQ8C552 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Fam78aQ8C552 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.61■■□□□ 1.21
Fam78aQ8C552 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Fam78aQ8C552 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Fam78aQ8C552 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.6■■□□□ 1.21
Fam78aQ8C552 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Fam78aQ8C552 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Fam78aQ8C552 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Fam78aQ8C552 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Fam78aQ8C552 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Fam78aQ8C552 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Fam78aQ8C552 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.59■■□□□ 1.21
Fam78aQ8C552 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Fam78aQ8C552 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Fam78aQ8C552 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Fam78aQ8C552 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.58■■□□□ 1.21
Fam78aQ8C552 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Fam78aQ8C552 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Fam78aQ8C552 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Fam78aQ8C552 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
Fam78aQ8C552 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Fam78aQ8C552 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Fam78aQ8C552 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.57■■□□□ 1.2
Fam78aQ8C552 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Fam78aQ8C552 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Fam78aQ8C552 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Fam78aQ8C552 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.57■■□□□ 1.2
Fam78aQ8C552 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Fam78aQ8C552 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Fam78aQ8C552 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Fam78aQ8C552 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Fam78aQ8C552 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Fam78aQ8C552 Serp2-204ENSMUST00000228055 705 ntBASIC22.56■■□□□ 1.2
Fam78aQ8C552 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms