Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.07■■□□□ 1.12
Sh3rf3Q8C120 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.07■■□□□ 1.12
Sh3rf3Q8C120 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3rf3Q8C120 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3rf3Q8C120 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.06■■□□□ 1.12
Sh3rf3Q8C120 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Sh3rf3Q8C120 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3rf3Q8C120 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3rf3Q8C120 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Sh3rf3Q8C120 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3rf3Q8C120 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3rf3Q8C120 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Sh3rf3Q8C120 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3rf3Q8C120 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3rf3Q8C120 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3rf3Q8C120 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Sh3rf3Q8C120 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3rf3Q8C120 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sh3rf3Q8C120 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sh3rf3Q8C120 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.04■■□□□ 1.12
Sh3rf3Q8C120 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.04■■□□□ 1.12
Sh3rf3Q8C120 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.04■■□□□ 1.12
Sh3rf3Q8C120 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Sh3rf3Q8C120 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sh3rf3Q8C120 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sh3rf3Q8C120 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.03■■□□□ 1.12
Sh3rf3Q8C120 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sh3rf3Q8C120 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sh3rf3Q8C120 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.03■■□□□ 1.12
Sh3rf3Q8C120 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sh3rf3Q8C120 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sh3rf3Q8C120 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3rf3Q8C120 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.02■■□□□ 1.12
Sh3rf3Q8C120 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3rf3Q8C120 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3rf3Q8C120 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Gm13238-201ENSMUST00000117655 780 ntBASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf3Q8C120 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sh3rf3Q8C120 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22■■□□□ 1.11
Sh3rf3Q8C120 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf3Q8C120 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf3Q8C120 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf3Q8C120 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf3Q8C120 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf3Q8C120 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.99■■□□□ 1.11
Sh3rf3Q8C120 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf3Q8C120 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf3Q8C120 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf3Q8C120 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Sh3rf3Q8C120 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Sh3rf3Q8C120 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3rf3Q8C120 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.98■■□□□ 1.11
Sh3rf3Q8C120 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3rf3Q8C120 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3rf3Q8C120 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3rf3Q8C120 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.97■■□□□ 1.11
Sh3rf3Q8C120 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Sh3rf3Q8C120 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3rf3Q8C120 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3rf3Q8C120 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3rf3Q8C120 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.96■■□□□ 1.11
Sh3rf3Q8C120 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
Sh3rf3Q8C120 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.96■■□□□ 1.11
Sh3rf3Q8C120 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3rf3Q8C120 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3rf3Q8C120 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3rf3Q8C120 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3rf3Q8C120 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Sh3rf3Q8C120 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3rf3Q8C120 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3rf3Q8C120 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3rf3Q8C120 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3rf3Q8C120 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3rf3Q8C120 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3rf3Q8C120 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3rf3Q8C120 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3rf3Q8C120 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.94■■□□□ 1.1
Sh3rf3Q8C120 Gm5921-201ENSMUST00000075898 882 ntBASIC21.94■■□□□ 1.1
Sh3rf3Q8C120 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3rf3Q8C120 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Sh3rf3Q8C120 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3rf3Q8C120 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3rf3Q8C120 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3rf3Q8C120 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3rf3Q8C120 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Sh3rf3Q8C120 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3rf3Q8C120 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms