Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC190Q86UF4 SETD8P1-201ENST00000623146 1180 ntBASIC20.51■□□□□ 0.87
CCDC190Q86UF4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC190Q86UF4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC190Q86UF4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC190Q86UF4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC190Q86UF4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC190Q86UF4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC190Q86UF4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC190Q86UF4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC190Q86UF4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC190Q86UF4 AC127496.7-201ENST00000625110 1798 ntBASIC20.5■□□□□ 0.87
CCDC190Q86UF4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC190Q86UF4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC190Q86UF4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC190Q86UF4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC190Q86UF4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC190Q86UF4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC190Q86UF4 AC108673.1-201ENST00000510422 1159 ntBASIC20.48■□□□□ 0.87
CCDC190Q86UF4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC190Q86UF4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CCDC190Q86UF4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC190Q86UF4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCDC190Q86UF4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC190Q86UF4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC190Q86UF4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.47■□□□□ 0.87
CCDC190Q86UF4 CAHM-201ENST00000604200 896 ntBASIC20.47■□□□□ 0.87
CCDC190Q86UF4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 AC007375.3-201ENST00000600936 2314 ntBASIC20.46■□□□□ 0.87
CCDC190Q86UF4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC190Q86UF4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.45■□□□□ 0.87
CCDC190Q86UF4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.45■□□□□ 0.86
CCDC190Q86UF4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCDC190Q86UF4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 MIR6090-201ENST00000622481 60 ntBASIC20.44■□□□□ 0.86
CCDC190Q86UF4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC190Q86UF4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC190Q86UF4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC190Q86UF4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCDC190Q86UF4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC190Q86UF4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC190Q86UF4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC190Q86UF4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC190Q86UF4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC190Q86UF4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 MIR762-201ENST00000390236 83 ntBASIC20.42■□□□□ 0.86
CCDC190Q86UF4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC190Q86UF4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms