Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM1Q86UE6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM1Q86UE6 CR559946.2-201ENST00000623684 991 ntBASIC20.36■□□□□ 0.85
LRRTM1Q86UE6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM1Q86UE6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM1Q86UE6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.36■□□□□ 0.85
LRRTM1Q86UE6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 ZNRF2P2-203ENST00000454624 420 ntBASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRTM1Q86UE6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRTM1Q86UE6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.34■□□□□ 0.85
LRRTM1Q86UE6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LRRTM1Q86UE6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRTM1Q86UE6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRRTM1Q86UE6 AL157400.5-201ENST00000507624 621 ntBASIC20.33■□□□□ 0.85
LRRTM1Q86UE6 AC025884.2-201ENST00000553429 711 ntBASIC20.33■□□□□ 0.85
LRRTM1Q86UE6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRTM1Q86UE6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM1Q86UE6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM1Q86UE6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM1Q86UE6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LRRTM1Q86UE6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM1Q86UE6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM1Q86UE6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM1Q86UE6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRTM1Q86UE6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRTM1Q86UE6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRTM1Q86UE6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.31■□□□□ 0.84
LRRTM1Q86UE6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LRRTM1Q86UE6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRRTM1Q86UE6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LRRTM1Q86UE6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.3■□□□□ 0.84
LRRTM1Q86UE6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRTM1Q86UE6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRTM1Q86UE6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRTM1Q86UE6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRTM1Q86UE6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRTM1Q86UE6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRTM1Q86UE6 AC079834.2-201ENST00000609776 1949 ntBASIC20.29■□□□□ 0.84
LRRTM1Q86UE6 HLA-L-211ENST00000482052 1765 ntBASIC20.29■□□□□ 0.84
LRRTM1Q86UE6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM1Q86UE6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LRRTM1Q86UE6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LRRTM1Q86UE6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM1Q86UE6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRTM1Q86UE6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM1Q86UE6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRTM1Q86UE6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM1Q86UE6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRTM1Q86UE6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM1Q86UE6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LRRTM1Q86UE6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM1Q86UE6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRTM1Q86UE6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM1Q86UE6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM1Q86UE6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.28■□□□□ 0.84
LRRTM1Q86UE6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM1Q86UE6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM1Q86UE6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM1Q86UE6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM1Q86UE6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM1Q86UE6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRTM1Q86UE6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM1Q86UE6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRRTM1Q86UE6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM1Q86UE6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
LRRTM1Q86UE6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 MIR3960-201ENST00000583311 91 ntBASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
LRRTM1Q86UE6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM1Q86UE6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM1Q86UE6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM1Q86UE6 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.25■□□□□ 0.83
LRRTM1Q86UE6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM1Q86UE6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRTM1Q86UE6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM1Q86UE6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM1Q86UE6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRTM1Q86UE6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM1Q86UE6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRTM1Q86UE6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.24■□□□□ 0.83
LRRTM1Q86UE6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
LRRTM1Q86UE6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM1Q86UE6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms