Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trnp1Q80ZI1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Trnp1Q80ZI1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.41■■□□□ 1.5
Trnp1Q80ZI1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trnp1Q80ZI1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trnp1Q80ZI1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Trnp1Q80ZI1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Trnp1Q80ZI1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trnp1Q80ZI1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trnp1Q80ZI1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trnp1Q80ZI1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trnp1Q80ZI1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trnp1Q80ZI1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Trnp1Q80ZI1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trnp1Q80ZI1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.4■■□□□ 1.5
Trnp1Q80ZI1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Trnp1Q80ZI1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trnp1Q80ZI1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trnp1Q80ZI1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trnp1Q80ZI1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trnp1Q80ZI1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trnp1Q80ZI1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Trnp1Q80ZI1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.39■■□□□ 1.49
Trnp1Q80ZI1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trnp1Q80ZI1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Trnp1Q80ZI1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Trnp1Q80ZI1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Trnp1Q80ZI1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.38■■□□□ 1.49
Trnp1Q80ZI1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Trnp1Q80ZI1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trnp1Q80ZI1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trnp1Q80ZI1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Trnp1Q80ZI1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trnp1Q80ZI1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
Trnp1Q80ZI1 Mir7075-201ENSMUST00000184187 82 ntBASIC24.37■■□□□ 1.49
Trnp1Q80ZI1 Gm43017-201ENSMUST00000198296 752 ntBASIC24.37■■□□□ 1.49
Trnp1Q80ZI1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trnp1Q80ZI1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trnp1Q80ZI1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trnp1Q80ZI1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Trnp1Q80ZI1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trnp1Q80ZI1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trnp1Q80ZI1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Trnp1Q80ZI1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trnp1Q80ZI1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trnp1Q80ZI1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trnp1Q80ZI1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Trnp1Q80ZI1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trnp1Q80ZI1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trnp1Q80ZI1 Gm29257-201ENSMUST00000186115 639 ntBASIC24.34■■□□□ 1.49
Trnp1Q80ZI1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.34■■□□□ 1.49
Trnp1Q80ZI1 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.34■■□□□ 1.49
Trnp1Q80ZI1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trnp1Q80ZI1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.34■■□□□ 1.49
Trnp1Q80ZI1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trnp1Q80ZI1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.34■■□□□ 1.49
Trnp1Q80ZI1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trnp1Q80ZI1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trnp1Q80ZI1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.33■■□□□ 1.49
Trnp1Q80ZI1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trnp1Q80ZI1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.33■■□□□ 1.49
Trnp1Q80ZI1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trnp1Q80ZI1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trnp1Q80ZI1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
Trnp1Q80ZI1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trnp1Q80ZI1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trnp1Q80ZI1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trnp1Q80ZI1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trnp1Q80ZI1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trnp1Q80ZI1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trnp1Q80ZI1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.3■■□□□ 1.48
Trnp1Q80ZI1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trnp1Q80ZI1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Trnp1Q80ZI1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trnp1Q80ZI1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trnp1Q80ZI1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.29■■□□□ 1.48
Trnp1Q80ZI1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trnp1Q80ZI1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC24.29■■□□□ 1.48
Trnp1Q80ZI1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trnp1Q80ZI1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Trnp1Q80ZI1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.28■■□□□ 1.48
Trnp1Q80ZI1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.28■■□□□ 1.48
Trnp1Q80ZI1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.28■■□□□ 1.48
Trnp1Q80ZI1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 Gm8493-201ENSMUST00000196881 489 ntBASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trnp1Q80ZI1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trnp1Q80ZI1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trnp1Q80ZI1 Gm5874-201ENSMUST00000096101 508 ntBASIC24.26■■□□□ 1.47
Trnp1Q80ZI1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Trnp1Q80ZI1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms