Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp8Q80U87 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp8Q80U87 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Usp8Q80U87 Gm14523-201ENSMUST00000117260 558 ntBASIC21.07■□□□□ 0.96
Usp8Q80U87 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp8Q80U87 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp8Q80U87 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp8Q80U87 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.07■□□□□ 0.96
Usp8Q80U87 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp8Q80U87 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp8Q80U87 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp8Q80U87 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp8Q80U87 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp8Q80U87 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp8Q80U87 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp8Q80U87 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp8Q80U87 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
Usp8Q80U87 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Usp8Q80U87 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Usp8Q80U87 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp8Q80U87 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.05■□□□□ 0.96
Usp8Q80U87 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.05■□□□□ 0.96
Usp8Q80U87 Mir6538-201ENSMUST00000183713 110 ntBASIC21.05■□□□□ 0.96
Usp8Q80U87 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp8Q80U87 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp8Q80U87 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp8Q80U87 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp8Q80U87 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp8Q80U87 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp8Q80U87 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Usp8Q80U87 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Usp8Q80U87 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp8Q80U87 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp8Q80U87 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Usp8Q80U87 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp8Q80U87 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Usp8Q80U87 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Usp8Q80U87 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp8Q80U87 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp8Q80U87 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp8Q80U87 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp8Q80U87 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp8Q80U87 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp8Q80U87 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Usp8Q80U87 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Usp8Q80U87 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp8Q80U87 Gm7332-201ENSMUST00000118351 454 ntBASIC21.02■□□□□ 0.96
Usp8Q80U87 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.02■□□□□ 0.96
Usp8Q80U87 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.02■□□□□ 0.96
Usp8Q80U87 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.02■□□□□ 0.96
Usp8Q80U87 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Usp8Q80U87 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.01■□□□□ 0.95
Usp8Q80U87 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.01■□□□□ 0.95
Usp8Q80U87 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp8Q80U87 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.01■□□□□ 0.95
Usp8Q80U87 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Usp8Q80U87 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp8Q80U87 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp8Q80U87 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp8Q80U87 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Usp8Q80U87 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Usp8Q80U87 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp8Q80U87 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp8Q80U87 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp8Q80U87 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp8Q80U87 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp8Q80U87 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp8Q80U87 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.98■□□□□ 0.95
Usp8Q80U87 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp8Q80U87 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp8Q80U87 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp8Q80U87 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp8Q80U87 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp8Q80U87 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp8Q80U87 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Usp8Q80U87 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
Usp8Q80U87 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp8Q80U87 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp8Q80U87 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp8Q80U87 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp8Q80U87 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.97■□□□□ 0.95
Usp8Q80U87 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp8Q80U87 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp8Q80U87 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp8Q80U87 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp8Q80U87 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp8Q80U87 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp8Q80U87 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp8Q80U87 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp8Q80U87 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.96■□□□□ 0.95
Usp8Q80U87 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp8Q80U87 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp8Q80U87 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp8Q80U87 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Usp8Q80U87 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp8Q80U87 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp8Q80U87 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Usp8Q80U87 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp8Q80U87 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp8Q80U87 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms