Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.02■□□□□ 0.96
NHLRC1Q6VVB1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NHLRC1Q6VVB1 FOXO3B-201ENST00000395675 1928 ntBASIC21.02■□□□□ 0.96
NHLRC1Q6VVB1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NHLRC1Q6VVB1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NHLRC1Q6VVB1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.02■□□□□ 0.96
NHLRC1Q6VVB1 MIR6089-201ENST00000616698 64 ntBASIC21.02■□□□□ 0.96
NHLRC1Q6VVB1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NHLRC1Q6VVB1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NHLRC1Q6VVB1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NHLRC1Q6VVB1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.02■□□□□ 0.95
NHLRC1Q6VVB1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NHLRC1Q6VVB1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.01■□□□□ 0.95
NHLRC1Q6VVB1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NHLRC1Q6VVB1 LONRF2P2-201ENST00000439212 571 ntBASIC21.01■□□□□ 0.95
NHLRC1Q6VVB1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NHLRC1Q6VVB1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NHLRC1Q6VVB1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21■□□□□ 0.95
NHLRC1Q6VVB1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21■□□□□ 0.95
NHLRC1Q6VVB1 AP003733.4-201ENST00000623785 1697 ntBASIC21■□□□□ 0.95
NHLRC1Q6VVB1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NHLRC1Q6VVB1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NHLRC1Q6VVB1 AC004987.1-201ENST00000428627 508 ntBASIC21■□□□□ 0.95
NHLRC1Q6VVB1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
NHLRC1Q6VVB1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21■□□□□ 0.95
NHLRC1Q6VVB1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21■□□□□ 0.95
NHLRC1Q6VVB1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NHLRC1Q6VVB1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NHLRC1Q6VVB1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.99■□□□□ 0.95
NHLRC1Q6VVB1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NHLRC1Q6VVB1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NHLRC1Q6VVB1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NHLRC1Q6VVB1 ATP5G2P3-201ENST00000429083 425 ntBASIC20.99■□□□□ 0.95
NHLRC1Q6VVB1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NHLRC1Q6VVB1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NHLRC1Q6VVB1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NHLRC1Q6VVB1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NHLRC1Q6VVB1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NHLRC1Q6VVB1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.98■□□□□ 0.95
NHLRC1Q6VVB1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NHLRC1Q6VVB1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.98■□□□□ 0.95
NHLRC1Q6VVB1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.98■□□□□ 0.95
NHLRC1Q6VVB1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NHLRC1Q6VVB1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.98■□□□□ 0.95
NHLRC1Q6VVB1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.98■□□□□ 0.95
NHLRC1Q6VVB1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NHLRC1Q6VVB1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 AL139125.2-201ENST00000623134 1869 ntBASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 DUX4L18-201ENST00000553347 1267 ntBASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NHLRC1Q6VVB1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NHLRC1Q6VVB1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NHLRC1Q6VVB1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NHLRC1Q6VVB1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NHLRC1Q6VVB1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NHLRC1Q6VVB1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NHLRC1Q6VVB1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NHLRC1Q6VVB1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.96■□□□□ 0.95
NHLRC1Q6VVB1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NHLRC1Q6VVB1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NHLRC1Q6VVB1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NHLRC1Q6VVB1 AC019171.1-201ENST00000601251 1056 ntBASIC20.94■□□□□ 0.94
NHLRC1Q6VVB1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NHLRC1Q6VVB1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NHLRC1Q6VVB1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NHLRC1Q6VVB1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NHLRC1Q6VVB1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NHLRC1Q6VVB1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NHLRC1Q6VVB1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms