Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-3Q5R1E6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-3Q5R1E6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6-3Q5R1E6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-3Q5R1E6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-3Q5R1E6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-3Q5R1E6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-3Q5R1E6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-3Q5R1E6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trav6-3Q5R1E6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-3Q5R1E6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-3Q5R1E6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-3Q5R1E6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-3Q5R1E6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-3Q5R1E6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav6-3Q5R1E6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-3Q5R1E6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-3Q5R1E6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav6-3Q5R1E6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav6-3Q5R1E6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav6-3Q5R1E6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-3Q5R1E6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Trav6-3Q5R1E6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.96■□□□□ 0.31
Trav6-3Q5R1E6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
Trav6-3Q5R1E6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6-3Q5R1E6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trav6-3Q5R1E6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6-3Q5R1E6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6-3Q5R1E6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trav6-3Q5R1E6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-3Q5R1E6 Gm14523-201ENSMUST00000117260 558 ntBASIC16.95■□□□□ 0.3
Trav6-3Q5R1E6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav6-3Q5R1E6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-3Q5R1E6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-3Q5R1E6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-3Q5R1E6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-3Q5R1E6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-3Q5R1E6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-3Q5R1E6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-3Q5R1E6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-3Q5R1E6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Trav6-3Q5R1E6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-3Q5R1E6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-3Q5R1E6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-3Q5R1E6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-3Q5R1E6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-3Q5R1E6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav6-3Q5R1E6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-3Q5R1E6 Gm27502-201ENSMUST00000183495 199 ntBASIC16.92■□□□□ 0.3
Trav6-3Q5R1E6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.92■□□□□ 0.3
Trav6-3Q5R1E6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-3Q5R1E6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-3Q5R1E6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-3Q5R1E6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav6-3Q5R1E6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-3Q5R1E6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav6-3Q5R1E6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav6-3Q5R1E6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-3Q5R1E6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-3Q5R1E6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav6-3Q5R1E6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-3Q5R1E6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-3Q5R1E6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav6-3Q5R1E6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-3Q5R1E6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav6-3Q5R1E6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav6-3Q5R1E6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-3Q5R1E6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-3Q5R1E6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms