Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 BSC5YNR069C 1470 nt5.71□□□□□ -1.49
PDH1Q12428 RTT106YNL206C 1368 nt5.71□□□□□ -1.5
PDH1Q12428 APS3YJL024C 585 nt5.71□□□□□ -1.5
PDH1Q12428 YJR115WYJR115W 510 nt5.71□□□□□ -1.5
PDH1Q12428 DUS4YLR405W 1104 nt5.71□□□□□ -1.5
PDH1Q12428 YPL062WYPL062W 405 nt5.71□□□□□ -1.5
PDH1Q12428 ERG7YHR072W 2196 nt5.71□□□□□ -1.5
PDH1Q12428 PRP46YPL151C 1356 nt5.7□□□□□ -1.5
PDH1Q12428 MHR1YDR296W 681 nt5.7□□□□□ -1.5
PDH1Q12428 COS6YGR295C 1146 nt5.7□□□□□ -1.5
PDH1Q12428 HSX1tR(CCU)J 72 nt5.7□□□□□ -1.5
PDH1Q12428 YMR010WYMR010W 1218 nt5.7□□□□□ -1.5
PDH1Q12428 SCO2YBR024W 906 nt5.7□□□□□ -1.5
PDH1Q12428 SCP1YOR367W 603 nt5.7□□□□□ -1.5
PDH1Q12428 NOB1YOR056C 1380 nt5.69□□□□□ -1.5
PDH1Q12428 GPI11YDR302W 660 nt5.69□□□□□ -1.5
PDH1Q12428 YHR095WYHR095W 495 nt5.69□□□□□ -1.5
PDH1Q12428 LYS12YIL094C 1116 nt5.69□□□□□ -1.5
PDH1Q12428 YAL056C-AYAL056C-A 351 nt5.69□□□□□ -1.5
PDH1Q12428 TFS1YLR178C 660 nt5.69□□□□□ -1.5
PDH1Q12428 UBX2YML013W 1755 nt5.69□□□□□ -1.5
PDH1Q12428 CTS2YDR371W 1536 nt5.69□□□□□ -1.5
PDH1Q12428 HOS2YGL194C 1359 nt5.68□□□□□ -1.5
PDH1Q12428 SRV2YNL138W 1581 nt5.68□□□□□ -1.5
PDH1Q12428 AVT4YNL101W 2142 nt5.68□□□□□ -1.5
PDH1Q12428 UPS3YDR185C 540 nt5.68□□□□□ -1.5
PDH1Q12428 PRO3YER023W 861 nt5.68□□□□□ -1.5
PDH1Q12428 SLO1YER180C-A 258 nt5.68□□□□□ -1.5
PDH1Q12428 YKL107WYKL107W 930 nt5.68□□□□□ -1.5
PDH1Q12428 YNL019CYNL019C 855 nt5.68□□□□□ -1.5
PDH1Q12428 YNL033WYNL033W 855 nt5.68□□□□□ -1.5
PDH1Q12428 YNR040WYNR040W 771 nt5.68□□□□□ -1.5
PDH1Q12428 PFK2YMR205C 2880 nt5.67□□□□□ -1.5
PDH1Q12428 RPT6YGL048C 1218 nt5.67□□□□□ -1.5
PDH1Q12428 CIS3YJL158C 684 nt5.67□□□□□ -1.5
PDH1Q12428 PIN2YOR104W 849 nt5.67□□□□□ -1.5
PDH1Q12428 MED4YOR174W 855 nt5.67□□□□□ -1.5
PDH1Q12428 CSG2YBR036C 1233 nt5.67□□□□□ -1.5
PDH1Q12428 CDS1YBR029C 1374 nt5.67□□□□□ -1.5
PDH1Q12428 SIR2YDL042C 1689 nt5.66□□□□□ -1.5
PDH1Q12428 IMA5YJL216C 1746 nt5.66□□□□□ -1.5
PDH1Q12428 EFT2YDR385W 2529 nt5.66□□□□□ -1.5
PDH1Q12428 EFT1YOR133W 2529 nt5.66□□□□□ -1.5
PDH1Q12428 COX26YDR119W-A 201 nt5.66□□□□□ -1.5
PDH1Q12428 RPL12AYEL054C 498 nt5.66□□□□□ -1.5
PDH1Q12428 PDE1YGL248W 1110 nt5.66□□□□□ -1.5
PDH1Q12428 YMR147WYMR147W 672 nt5.66□□□□□ -1.5
PDH1Q12428 YEF1YEL041W 1488 nt5.65□□□□□ -1.5
PDH1Q12428 YRF1-4YLR466W 4149 nt5.65□□□□□ -1.5
PDH1Q12428 MRPL1YDR116C 858 nt5.65□□□□□ -1.5
PDH1Q12428 YOR318CYOR318C 306 nt5.65□□□□□ -1.5
PDH1Q12428 RPN7YPR108W 1290 nt5.65□□□□□ -1.5
PDH1Q12428 IFA38YBR159W 1044 nt5.65□□□□□ -1.5
PDH1Q12428 YME1YPR024W 2244 nt5.64□□□□□ -1.51
PDH1Q12428 UGO1YDR470C 1509 nt5.64□□□□□ -1.51
PDH1Q12428 NDC1YML031W 1968 nt5.64□□□□□ -1.51
PDH1Q12428 CAD1YDR423C 1230 nt5.64□□□□□ -1.51
PDH1Q12428 YER010CYER010C 705 nt5.64□□□□□ -1.51
PDH1Q12428 HAP2YGL237C 798 nt5.64□□□□□ -1.51
PDH1Q12428 NPA3YJR072C 1158 nt5.64□□□□□ -1.51
PDH1Q12428 AST1YBL069W 1290 nt5.64□□□□□ -1.51
PDH1Q12428 OCA1YNL099C 717 nt5.64□□□□□ -1.51
PDH1Q12428 SAM4YPL273W 978 nt5.64□□□□□ -1.51
PDH1Q12428 PYC1YGL062W 3537 nt5.63□□□□□ -1.51
PDH1Q12428 YIL055CYIL055C 1884 nt5.63□□□□□ -1.51
PDH1Q12428 HMLALPHA1YCL066W 528 nt5.63□□□□□ -1.51
PDH1Q12428 MATALPHA1YCR040W 528 nt5.63□□□□□ -1.51
PDH1Q12428 SUP2tY(GUA)D 75 nt5.63□□□□□ -1.51
PDH1Q12428 SUP11tY(GUA)F1 75 nt5.63□□□□□ -1.51
PDH1Q12428 SUP6tY(GUA)F2 75 nt5.63□□□□□ -1.51
PDH1Q12428 SUP7tY(GUA)J1 75 nt5.63□□□□□ -1.51
PDH1Q12428 SUP4tY(GUA)J2 75 nt5.63□□□□□ -1.51
PDH1Q12428 SUP5tY(GUA)M1 75 nt5.63□□□□□ -1.51
PDH1Q12428 SUP8tY(GUA)M2 75 nt5.63□□□□□ -1.51
PDH1Q12428 SUP3tY(GUA)O 75 nt5.63□□□□□ -1.51
PDH1Q12428 YOL097W-AYOL097W-A 186 nt5.63□□□□□ -1.51
PDH1Q12428 ABZ1YNR033W 2364 nt5.62□□□□□ -1.51
PDH1Q12428 YCR075W-AYCR075W-A 228 nt5.62□□□□□ -1.51
PDH1Q12428 ATO3YDR384C 828 nt5.62□□□□□ -1.51
PDH1Q12428 YJU3YKL094W 942 nt5.62□□□□□ -1.51
PDH1Q12428 COS9YKL219W 1224 nt5.62□□□□□ -1.51
PDH1Q12428 GEP5YLR091W 882 nt5.62□□□□□ -1.51
PDH1Q12428 SRN2YLR119W 642 nt5.62□□□□□ -1.51
PDH1Q12428 HCR1YLR192C 798 nt5.62□□□□□ -1.51
PDH1Q12428 YML083CYML083C 1257 nt5.62□□□□□ -1.51
PDH1Q12428 YMR030W-AYMR030W-A 291 nt5.62□□□□□ -1.51
PDH1Q12428 RFA2YNL312W 822 nt5.62□□□□□ -1.51
PDH1Q12428 YPL071CYPL071C 471 nt5.62□□□□□ -1.51
PDH1Q12428 VID30YGL227W 2877 nt5.62□□□□□ -1.51
PDH1Q12428 MPP10YJR002W 1782 nt5.62□□□□□ -1.51
PDH1Q12428 GET3YDL100C 1065 nt5.61□□□□□ -1.51
PDH1Q12428 RTT103YDR289C 1230 nt5.61□□□□□ -1.51
PDH1Q12428 ASP1YDR321W 1146 nt5.61□□□□□ -1.51
PDH1Q12428 SEC20YDR498C 1152 nt5.61□□□□□ -1.51
PDH1Q12428 YFR034W-AYFR034W-A 288 nt5.61□□□□□ -1.51
PDH1Q12428 ACS1YAL054C 2142 nt5.61□□□□□ -1.51
PDH1Q12428 YLL059CYLL059C 507 nt5.61□□□□□ -1.51
PDH1Q12428 ATP14YLR295C 375 nt5.61□□□□□ -1.51
PDH1Q12428 TAF11YML015C 1041 nt5.61□□□□□ -1.51
PDH1Q12428 YML082WYML082W 1950 nt5.61□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 32 ms