Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 tN(GUU)O1tN(GUU)O1 74 nt5.74□□□□□ -1.49
HRD3Q05787 tN(GUU)O2tN(GUU)O2 74 nt5.74□□□□□ -1.49
HRD3Q05787 tN(GUU)PtN(GUU)P 74 nt5.74□□□□□ -1.49
HRD3Q05787 PIN2YOR104W 849 nt5.74□□□□□ -1.49
HRD3Q05787 ELC1YPL046C 300 nt5.74□□□□□ -1.49
HRD3Q05787 ECM2YBR065C 1095 nt5.74□□□□□ -1.49
HRD3Q05787 SMF2YHR050W 1650 nt5.74□□□□□ -1.49
HRD3Q05787 YEH1YLL012W 1722 nt5.74□□□□□ -1.49
HRD3Q05787 ATG18YFR021W 1503 nt5.74□□□□□ -1.49
HRD3Q05787 ATF1YOR377W 1578 nt5.73□□□□□ -1.49
HRD3Q05787 YDR514CYDR514C 1452 nt5.73□□□□□ -1.49
HRD3Q05787 YDL034WYDL034W 345 nt5.73□□□□□ -1.49
HRD3Q05787 COX26YDR119W-A 201 nt5.73□□□□□ -1.49
HRD3Q05787 YIR043CYIR043C 693 nt5.73□□□□□ -1.49
HRD3Q05787 SPC24YMR117C 642 nt5.73□□□□□ -1.49
HRD3Q05787 HAL1YPR005C 885 nt5.73□□□□□ -1.49
HRD3Q05787 SLX5YDL013W 1860 nt5.73□□□□□ -1.49
HRD3Q05787 BSC5YNR069C 1470 nt5.72□□□□□ -1.49
HRD3Q05787 RTT106YNL206C 1368 nt5.72□□□□□ -1.49
HRD3Q05787 EFT2YDR385W 2529 nt5.72□□□□□ -1.49
HRD3Q05787 EFT1YOR133W 2529 nt5.72□□□□□ -1.49
HRD3Q05787 CAD1YDR423C 1230 nt5.72□□□□□ -1.49
HRD3Q05787 PPM1YDR435C 987 nt5.72□□□□□ -1.49
HRD3Q05787 SNZ3YFL059W 897 nt5.72□□□□□ -1.49
HRD3Q05787 DAL3YIR032C 588 nt5.72□□□□□ -1.49
HRD3Q05787 PGU1YJR153W 1086 nt5.72□□□□□ -1.49
HRD3Q05787 MRPL13YKR006C 795 nt5.72□□□□□ -1.49
HRD3Q05787 YKR075CYKR075C 924 nt5.72□□□□□ -1.49
HRD3Q05787 SNZ2YNL333W 897 nt5.72□□□□□ -1.49
HRD3Q05787 YFR006WYFR006W 1608 nt5.72□□□□□ -1.49
HRD3Q05787 YIL055CYIL055C 1884 nt5.72□□□□□ -1.49
HRD3Q05787 MID1YNL291C 1647 nt5.71□□□□□ -1.5
HRD3Q05787 YDL057WYDL057W 987 nt5.71□□□□□ -1.5
HRD3Q05787 COS9YKL219W 1224 nt5.71□□□□□ -1.5
HRD3Q05787 TFS1YLR178C 660 nt5.71□□□□□ -1.5
HRD3Q05787 PGA3YML125C 939 nt5.71□□□□□ -1.5
HRD3Q05787 GFD1YMR255W 567 nt5.71□□□□□ -1.5
HRD3Q05787 NSE5YML023C 1671 nt5.71□□□□□ -1.5
HRD3Q05787 SHE10YGL228W 1734 nt5.71□□□□□ -1.5
HRD3Q05787 NUD1YOR373W 2556 nt5.7□□□□□ -1.5
HRD3Q05787 HER2YMR293C 1395 nt5.7□□□□□ -1.5
HRD3Q05787 RCK1YGL158W 1539 nt5.7□□□□□ -1.5
HRD3Q05787 STB5YHR178W 2232 nt5.7□□□□□ -1.5
HRD3Q05787 MLC1YGL106W 450 nt5.7□□□□□ -1.5
HRD3Q05787 YNL228WYNL228W 777 nt5.7□□□□□ -1.5
HRD3Q05787 CAR1YPL111W 1002 nt5.7□□□□□ -1.5
HRD3Q05787 TIP41YPR040W 1071 nt5.7□□□□□ -1.5
HRD3Q05787 CSC1YLR241W 2349 nt5.7□□□□□ -1.5
HRD3Q05787 RKM4YDR257C 1485 nt5.7□□□□□ -1.5
HRD3Q05787 TEA1YOR337W 2280 nt5.69□□□□□ -1.5
HRD3Q05787 TRK2YKR050W 2670 nt5.69□□□□□ -1.5
HRD3Q05787 KNH1YDL049C 807 nt5.69□□□□□ -1.5
HRD3Q05787 YLL059CYLL059C 507 nt5.69□□□□□ -1.5
HRD3Q05787 YET2YMR040W 483 nt5.69□□□□□ -1.5
HRD3Q05787 YOL097W-AYOL097W-A 186 nt5.69□□□□□ -1.5
HRD3Q05787 RBD2YPL246C 789 nt5.69□□□□□ -1.5
HRD3Q05787 POP1YNL221C 2628 nt5.69□□□□□ -1.5
HRD3Q05787 GAA1YLR088W 1845 nt5.69□□□□□ -1.5
HRD3Q05787 HIR1YBL008W 2523 nt5.69□□□□□ -1.5
HRD3Q05787 RGD1YBR260C 2001 nt5.69□□□□□ -1.5
HRD3Q05787 STL1YDR536W 1710 nt5.68□□□□□ -1.5
HRD3Q05787 QDR3YBR043C 2070 nt5.68□□□□□ -1.5
HRD3Q05787 EMW1YNL313C 2715 nt5.68□□□□□ -1.5
HRD3Q05787 FES1YBR101C 873 nt5.68□□□□□ -1.5
HRD3Q05787 VPS5YOR069W 2028 nt5.68□□□□□ -1.5
HRD3Q05787 CLD1YGR110W 1338 nt5.68□□□□□ -1.5
HRD3Q05787 UGO1YDR470C 1509 nt5.68□□□□□ -1.5
HRD3Q05787 PAP2YOL115W 1755 nt5.67□□□□□ -1.5
HRD3Q05787 PTR2YKR093W 1806 nt5.67□□□□□ -1.5
HRD3Q05787 ATP1YBL099W 1638 nt5.67□□□□□ -1.5
HRD3Q05787 SAS4YDR181C 1446 nt5.67□□□□□ -1.5
HRD3Q05787 SPO77YLR341W 1434 nt5.67□□□□□ -1.5
HRD3Q05787 RTN1YDR233C 888 nt5.67□□□□□ -1.5
HRD3Q05787 RPL7AYGL076C 735 nt5.67□□□□□ -1.5
HRD3Q05787 MSA2YKR077W 1092 nt5.67□□□□□ -1.5
HRD3Q05787 REX3YLR107W 1215 nt5.67□□□□□ -1.5
HRD3Q05787 RPS15YOL040C 429 nt5.67□□□□□ -1.5
HRD3Q05787 RPL7BYPL198W 735 nt5.67□□□□□ -1.5
HRD3Q05787 ACS1YAL054C 2142 nt5.66□□□□□ -1.5
HRD3Q05787 TIM54YJL054W 1437 nt5.66□□□□□ -1.5
HRD3Q05787 ARH1YDR376W 1482 nt5.66□□□□□ -1.5
HRD3Q05787 DEF1YKL054C 2217 nt5.66□□□□□ -1.5
HRD3Q05787 PMT2YAL023C 2280 nt5.66□□□□□ -1.5
HRD3Q05787 FZF1YGL254W 900 nt5.66□□□□□ -1.5
HRD3Q05787 SPC42YKL042W 1092 nt5.66□□□□□ -1.5
HRD3Q05787 YLR118CYLR118C 684 nt5.66□□□□□ -1.5
HRD3Q05787 ODC2YOR222W 924 nt5.66□□□□□ -1.5
HRD3Q05787 GUA1YMR217W 1578 nt5.66□□□□□ -1.5
HRD3Q05787 YEF1YEL041W 1488 nt5.65□□□□□ -1.5
HRD3Q05787 YFL064CYFL064C 525 nt5.65□□□□□ -1.5
HRD3Q05787 GTO1YGR154C 1071 nt5.65□□□□□ -1.5
HRD3Q05787 ARR1YPR199C 885 nt5.65□□□□□ -1.5
HRD3Q05787 YPR202WYPR202W 717 nt5.65□□□□□ -1.5
HRD3Q05787 YNL247WYNL247W 2304 nt5.65□□□□□ -1.51
HRD3Q05787 GON7YJL184W 372 nt5.64□□□□□ -1.51
HRD3Q05787 PAT1YCR077C 2391 nt5.64□□□□□ -1.51
HRD3Q05787 KEL1YHR158C 3495 nt5.63□□□□□ -1.51
HRD3Q05787 VPS72YDR485C 2388 nt5.63□□□□□ -1.51
HRD3Q05787 snR57snR57 88 nt5.63□□□□□ -1.51
HRD3Q05787 IDP1YDL066W 1287 nt5.63□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 126 ms