Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.66■□□□□ 0.74
Cacna1aP97445 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1aP97445 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cacna1aP97445 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1aP97445 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cacna1aP97445 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1aP97445 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1aP97445 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1aP97445 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1aP97445 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.65■□□□□ 0.74
Cacna1aP97445 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1aP97445 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.65■□□□□ 0.74
Cacna1aP97445 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cacna1aP97445 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1aP97445 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.65■□□□□ 0.74
Cacna1aP97445 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1aP97445 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1aP97445 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna1aP97445 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna1aP97445 Gm5874-201ENSMUST00000096101 508 ntBASIC19.64■□□□□ 0.74
Cacna1aP97445 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cacna1aP97445 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1aP97445 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1aP97445 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1aP97445 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1aP97445 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.63■□□□□ 0.73
Cacna1aP97445 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.63■□□□□ 0.73
Cacna1aP97445 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.63■□□□□ 0.73
Cacna1aP97445 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cacna1aP97445 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1aP97445 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1aP97445 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1aP97445 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1aP97445 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1aP97445 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1aP97445 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1aP97445 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1aP97445 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1aP97445 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.61■□□□□ 0.73
Cacna1aP97445 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.61■□□□□ 0.73
Cacna1aP97445 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1aP97445 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1aP97445 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1aP97445 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1aP97445 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Cacna1aP97445 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cacna1aP97445 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.59■□□□□ 0.73
Cacna1aP97445 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1aP97445 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cacna1aP97445 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1aP97445 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Cacna1aP97445 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1aP97445 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1aP97445 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1aP97445 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1aP97445 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
Cacna1aP97445 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.58■□□□□ 0.73
Cacna1aP97445 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1aP97445 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1aP97445 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.58■□□□□ 0.72
Cacna1aP97445 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1aP97445 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Cacna1aP97445 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.57■□□□□ 0.72
Cacna1aP97445 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1aP97445 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cacna1aP97445 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.57■□□□□ 0.72
Cacna1aP97445 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1aP97445 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cacna1aP97445 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1aP97445 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1aP97445 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1aP97445 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cacna1aP97445 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1aP97445 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.56■□□□□ 0.72
Cacna1aP97445 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1aP97445 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Cacna1aP97445 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1aP97445 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.56■□□□□ 0.72
Cacna1aP97445 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1aP97445 Gm7291-201ENSMUST00000199147 382 ntBASIC19.56■□□□□ 0.72
Cacna1aP97445 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1aP97445 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1aP97445 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1aP97445 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cacna1aP97445 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1aP97445 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cacna1aP97445 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1aP97445 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1aP97445 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cacna1aP97445 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1aP97445 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cacna1aP97445 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.55■□□□□ 0.72
Cacna1aP97445 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cacna1aP97445 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1aP97445 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1aP97445 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1aP97445 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.54■□□□□ 0.72
Cacna1aP97445 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.54■□□□□ 0.72
Cacna1aP97445 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.54■□□□□ 0.72
Cacna1aP97445 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms