Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SgcaP82350 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcaP82350 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcaP82350 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcaP82350 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcaP82350 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SgcaP82350 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcaP82350 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcaP82350 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.61■□□□□ 0.41
SgcaP82350 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcaP82350 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SgcaP82350 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcaP82350 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcaP82350 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
SgcaP82350 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcaP82350 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.6■□□□□ 0.41
SgcaP82350 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SgcaP82350 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcaP82350 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcaP82350 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
SgcaP82350 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SgcaP82350 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.58■□□□□ 0.41
SgcaP82350 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SgcaP82350 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SgcaP82350 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SgcaP82350 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SgcaP82350 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SgcaP82350 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SgcaP82350 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SgcaP82350 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcaP82350 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcaP82350 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SgcaP82350 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SgcaP82350 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcaP82350 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.57■□□□□ 0.4
SgcaP82350 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.57■□□□□ 0.4
SgcaP82350 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.57■□□□□ 0.4
SgcaP82350 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcaP82350 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SgcaP82350 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcaP82350 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SgcaP82350 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SgcaP82350 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcaP82350 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcaP82350 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SgcaP82350 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SgcaP82350 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.56■□□□□ 0.4
SgcaP82350 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SgcaP82350 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SgcaP82350 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SgcaP82350 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SgcaP82350 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.56■□□□□ 0.4
SgcaP82350 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcaP82350 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcaP82350 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.55■□□□□ 0.4
SgcaP82350 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcaP82350 Gm9812-201ENSMUST00000061934 968 ntBASIC17.55■□□□□ 0.4
SgcaP82350 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SgcaP82350 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcaP82350 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcaP82350 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcaP82350 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcaP82350 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcaP82350 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcaP82350 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcaP82350 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SgcaP82350 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SgcaP82350 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.53■□□□□ 0.4
SgcaP82350 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.53■□□□□ 0.4
SgcaP82350 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
SgcaP82350 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.53■□□□□ 0.4
SgcaP82350 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcaP82350 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcaP82350 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SgcaP82350 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcaP82350 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.53■□□□□ 0.4
SgcaP82350 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.52■□□□□ 0.4
SgcaP82350 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcaP82350 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcaP82350 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcaP82350 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.52■□□□□ 0.4
SgcaP82350 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.52■□□□□ 0.4
SgcaP82350 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SgcaP82350 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SgcaP82350 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SgcaP82350 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SgcaP82350 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcaP82350 Iqck-206ENSMUST00000208658 2891 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms