Protein–RNA interactions for Protein: P54279

Pms2, Mismatch repair endonuclease PMS2, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pms2P54279 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pms2P54279 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Pms2P54279 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pms2P54279 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pms2P54279 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pms2P54279 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pms2P54279 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
Pms2P54279 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pms2P54279 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pms2P54279 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pms2P54279 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pms2P54279 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pms2P54279 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.65■■□□□ 1.06
Pms2P54279 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pms2P54279 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pms2P54279 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pms2P54279 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pms2P54279 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pms2P54279 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pms2P54279 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pms2P54279 Gm7332-201ENSMUST00000118351 454 ntBASIC21.64■■□□□ 1.05
Pms2P54279 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pms2P54279 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pms2P54279 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Pms2P54279 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pms2P54279 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pms2P54279 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pms2P54279 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pms2P54279 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pms2P54279 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.62■■□□□ 1.05
Pms2P54279 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.61■■□□□ 1.05
Pms2P54279 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pms2P54279 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pms2P54279 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pms2P54279 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pms2P54279 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pms2P54279 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pms2P54279 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.6■■□□□ 1.05
Pms2P54279 Gm12366-201ENSMUST00000121722 873 ntBASIC21.6■■□□□ 1.05
Pms2P54279 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.6■■□□□ 1.05
Pms2P54279 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pms2P54279 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.6■■□□□ 1.05
Pms2P54279 Gm5786-201ENSMUST00000085368 882 ntBASIC21.6■■□□□ 1.05
Pms2P54279 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pms2P54279 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pms2P54279 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pms2P54279 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pms2P54279 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pms2P54279 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pms2P54279 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pms2P54279 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.59■■□□□ 1.05
Pms2P54279 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pms2P54279 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pms2P54279 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Pms2P54279 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pms2P54279 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pms2P54279 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pms2P54279 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.58■■□□□ 1.05
Pms2P54279 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pms2P54279 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pms2P54279 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Pms2P54279 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.57■■□□□ 1.04
Pms2P54279 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.57■■□□□ 1.04
Pms2P54279 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.57■■□□□ 1.04
Pms2P54279 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pms2P54279 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pms2P54279 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.57■■□□□ 1.04
Pms2P54279 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pms2P54279 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pms2P54279 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pms2P54279 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pms2P54279 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pms2P54279 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pms2P54279 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pms2P54279 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pms2P54279 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pms2P54279 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pms2P54279 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pms2P54279 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pms2P54279 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.55■■□□□ 1.04
Pms2P54279 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.55■■□□□ 1.04
Pms2P54279 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pms2P54279 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pms2P54279 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pms2P54279 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pms2P54279 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pms2P54279 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pms2P54279 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pms2P54279 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.54■■□□□ 1.04
Pms2P54279 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.54■■□□□ 1.04
Pms2P54279 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pms2P54279 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pms2P54279 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pms2P54279 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pms2P54279 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pms2P54279 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pms2P54279 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pms2P54279 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pms2P54279 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pms2P54279 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 167 ms