Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 ABCB10P4-201ENST00000566803 2184 ntBASIC18.81■□□□□ 0.6
RAB5CP51148 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RAB5CP51148 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5CP51148 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB5CP51148 AC233723.2-201ENST00000623798 2106 ntBASIC18.81■□□□□ 0.6
RAB5CP51148 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5CP51148 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB5CP51148 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB5CP51148 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB5CP51148 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5CP51148 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB5CP51148 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB5CP51148 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB5CP51148 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB5CP51148 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RAB5CP51148 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5CP51148 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5CP51148 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5CP51148 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5CP51148 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB5CP51148 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5CP51148 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB5CP51148 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5CP51148 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB5CP51148 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5CP51148 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5CP51148 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5CP51148 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5CP51148 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5CP51148 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5CP51148 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5CP51148 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5CP51148 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5CP51148 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB5CP51148 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB5CP51148 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB5CP51148 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5CP51148 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5CP51148 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5CP51148 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5CP51148 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB5CP51148 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB5CP51148 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5CP51148 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB5CP51148 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RAB5CP51148 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5CP51148 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5CP51148 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5CP51148 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5CP51148 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5CP51148 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.77■□□□□ 0.59
RAB5CP51148 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.77■□□□□ 0.59
RAB5CP51148 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RAB5CP51148 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB5CP51148 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB5CP51148 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB5CP51148 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB5CP51148 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB5CP51148 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB5CP51148 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB5CP51148 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAB5CP51148 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB5CP51148 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB5CP51148 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RAB5CP51148 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB5CP51148 EP400NL-214ENST00000641289 2402 ntBASIC18.75■□□□□ 0.59
RAB5CP51148 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB5CP51148 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB5CP51148 SLC25A24-204ENST00000569674 2357 ntBASIC18.75■□□□□ 0.59
RAB5CP51148 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB5CP51148 AC137767.1-201ENST00000602918 1920 ntBASIC18.75■□□□□ 0.59
RAB5CP51148 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RAB5CP51148 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB5CP51148 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB5CP51148 AC127496.7-201ENST00000625110 1798 ntBASIC18.75■□□□□ 0.59
RAB5CP51148 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB5CP51148 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB5CP51148 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAB5CP51148 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB5CP51148 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB5CP51148 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RAB5CP51148 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB5CP51148 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.74■□□□□ 0.59
RAB5CP51148 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB5CP51148 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB5CP51148 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB5CP51148 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB5CP51148 AC110285.7-201ENST00000624417 1536 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms