Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TgfaP48030 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TgfaP48030 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TgfaP48030 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.49■□□□□ 0.55
TgfaP48030 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TgfaP48030 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TgfaP48030 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TgfaP48030 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
TgfaP48030 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TgfaP48030 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TgfaP48030 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TgfaP48030 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.49■□□□□ 0.55
TgfaP48030 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TgfaP48030 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.48■□□□□ 0.55
TgfaP48030 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TgfaP48030 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TgfaP48030 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.48■□□□□ 0.55
TgfaP48030 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TgfaP48030 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TgfaP48030 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TgfaP48030 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.47■□□□□ 0.55
TgfaP48030 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TgfaP48030 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TgfaP48030 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TgfaP48030 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TgfaP48030 Gm6139-201ENSMUST00000079261 882 ntBASIC18.46■□□□□ 0.55
TgfaP48030 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TgfaP48030 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TgfaP48030 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TgfaP48030 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TgfaP48030 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TgfaP48030 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TgfaP48030 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TgfaP48030 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TgfaP48030 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.45■□□□□ 0.54
TgfaP48030 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
TgfaP48030 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TgfaP48030 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TgfaP48030 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TgfaP48030 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TgfaP48030 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TgfaP48030 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TgfaP48030 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
TgfaP48030 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.44■□□□□ 0.54
TgfaP48030 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.44■□□□□ 0.54
TgfaP48030 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TgfaP48030 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TgfaP48030 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TgfaP48030 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.44■□□□□ 0.54
TgfaP48030 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TgfaP48030 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TgfaP48030 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TgfaP48030 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.43■□□□□ 0.54
TgfaP48030 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TgfaP48030 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TgfaP48030 Gm9870-201ENSMUST00000063874 645 ntBASIC18.43■□□□□ 0.54
TgfaP48030 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TgfaP48030 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TgfaP48030 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.42■□□□□ 0.54
TgfaP48030 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.42■□□□□ 0.54
TgfaP48030 Gm43137-201ENSMUST00000198052 594 ntBASIC18.42■□□□□ 0.54
TgfaP48030 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.42■□□□□ 0.54
TgfaP48030 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TgfaP48030 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TgfaP48030 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TgfaP48030 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TgfaP48030 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TgfaP48030 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TgfaP48030 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TgfaP48030 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TgfaP48030 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TgfaP48030 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TgfaP48030 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TgfaP48030 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TgfaP48030 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TgfaP48030 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TgfaP48030 Mir7075-201ENSMUST00000184187 82 ntBASIC18.4■□□□□ 0.54
TgfaP48030 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.4■□□□□ 0.54
TgfaP48030 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TgfaP48030 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TgfaP48030 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TgfaP48030 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.4■□□□□ 0.54
TgfaP48030 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TgfaP48030 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TgfaP48030 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TgfaP48030 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TgfaP48030 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TgfaP48030 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.38■□□□□ 0.53
TgfaP48030 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TgfaP48030 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TgfaP48030 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TgfaP48030 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TgfaP48030 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TgfaP48030 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.38■□□□□ 0.53
TgfaP48030 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TgfaP48030 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TgfaP48030 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TgfaP48030 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.38■□□□□ 0.53
TgfaP48030 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TgfaP48030 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms