Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps4bP46467 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Vps4bP46467 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps4bP46467 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps4bP46467 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps4bP46467 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.43■■□□□ 1.02
Vps4bP46467 Gm12366-201ENSMUST00000121722 873 ntBASIC21.43■■□□□ 1.02
Vps4bP46467 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.43■■□□□ 1.02
Vps4bP46467 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.43■■□□□ 1.02
Vps4bP46467 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.43■■□□□ 1.02
Vps4bP46467 Gm5786-201ENSMUST00000085368 882 ntBASIC21.43■■□□□ 1.02
Vps4bP46467 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps4bP46467 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps4bP46467 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Vps4bP46467 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.42■■□□□ 1.02
Vps4bP46467 Gm27502-201ENSMUST00000183495 199 ntBASIC21.42■■□□□ 1.02
Vps4bP46467 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.42■■□□□ 1.02
Vps4bP46467 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps4bP46467 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps4bP46467 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps4bP46467 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.41■■□□□ 1.02
Vps4bP46467 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.4■■□□□ 1.02
Vps4bP46467 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps4bP46467 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps4bP46467 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps4bP46467 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Vps4bP46467 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Vps4bP46467 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Vps4bP46467 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Vps4bP46467 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps4bP46467 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps4bP46467 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps4bP46467 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps4bP46467 Gm7332-201ENSMUST00000118351 454 ntBASIC21.38■■□□□ 1.01
Vps4bP46467 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vps4bP46467 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps4bP46467 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps4bP46467 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps4bP46467 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
Vps4bP46467 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps4bP46467 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps4bP46467 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps4bP46467 Gm15039-201ENSMUST00000118914 875 ntBASIC21.37■■□□□ 1.01
Vps4bP46467 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.37■■□□□ 1.01
Vps4bP46467 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.37■■□□□ 1.01
Vps4bP46467 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps4bP46467 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps4bP46467 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps4bP46467 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps4bP46467 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vps4bP46467 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps4bP46467 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps4bP46467 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.36■■□□□ 1.01
Vps4bP46467 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps4bP46467 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps4bP46467 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps4bP46467 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps4bP46467 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps4bP46467 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps4bP46467 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vps4bP46467 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.35■■□□□ 1.01
Vps4bP46467 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.35■■□□□ 1.01
Vps4bP46467 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.34■■□□□ 1.01
Vps4bP46467 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps4bP46467 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps4bP46467 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vps4bP46467 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Vps4bP46467 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps4bP46467 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps4bP46467 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps4bP46467 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps4bP46467 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Vps4bP46467 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vps4bP46467 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vps4bP46467 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vps4bP46467 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Vps4bP46467 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps4bP46467 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps4bP46467 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps4bP46467 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Vps4bP46467 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vps4bP46467 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps4bP46467 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vps4bP46467 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps4bP46467 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps4bP46467 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Vps4bP46467 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Vps4bP46467 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Vps4bP46467 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps4bP46467 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps4bP46467 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.31■■□□□ 1
Vps4bP46467 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps4bP46467 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps4bP46467 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Vps4bP46467 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Vps4bP46467 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps4bP46467 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vps4bP46467 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.3■■□□□ 1
Vps4bP46467 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps4bP46467 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms