Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmx3P42581 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmx3P42581 Terc-201ENSMUST00000082862 423 ntBASIC17.44■□□□□ 0.38
Hmx3P42581 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmx3P42581 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmx3P42581 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.44■□□□□ 0.38
Hmx3P42581 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmx3P42581 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmx3P42581 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmx3P42581 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmx3P42581 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmx3P42581 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmx3P42581 Gm6311-201ENSMUST00000073790 878 ntBASIC17.43■□□□□ 0.38
Hmx3P42581 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmx3P42581 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmx3P42581 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmx3P42581 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.42■□□□□ 0.38
Hmx3P42581 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmx3P42581 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.42■□□□□ 0.38
Hmx3P42581 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmx3P42581 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.42■□□□□ 0.38
Hmx3P42581 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmx3P42581 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.42■□□□□ 0.38
Hmx3P42581 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Hmx3P42581 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmx3P42581 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmx3P42581 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmx3P42581 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Hmx3P42581 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmx3P42581 Golph3-202ENSMUST00000226517 2359 ntBASIC17.41■□□□□ 0.38
Hmx3P42581 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Hmx3P42581 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.41■□□□□ 0.38
Hmx3P42581 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmx3P42581 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmx3P42581 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmx3P42581 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmx3P42581 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.4■□□□□ 0.38
Hmx3P42581 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmx3P42581 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hmx3P42581 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hmx3P42581 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmx3P42581 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hmx3P42581 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmx3P42581 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmx3P42581 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmx3P42581 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hmx3P42581 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmx3P42581 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmx3P42581 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmx3P42581 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmx3P42581 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmx3P42581 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmx3P42581 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmx3P42581 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hmx3P42581 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmx3P42581 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmx3P42581 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmx3P42581 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmx3P42581 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmx3P42581 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmx3P42581 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmx3P42581 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.37■□□□□ 0.37
Hmx3P42581 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmx3P42581 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmx3P42581 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.37■□□□□ 0.37
Hmx3P42581 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmx3P42581 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmx3P42581 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmx3P42581 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmx3P42581 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmx3P42581 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmx3P42581 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmx3P42581 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmx3P42581 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmx3P42581 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmx3P42581 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmx3P42581 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hmx3P42581 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmx3P42581 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmx3P42581 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmx3P42581 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmx3P42581 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmx3P42581 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Hmx3P42581 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmx3P42581 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmx3P42581 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmx3P42581 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmx3P42581 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmx3P42581 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.34■□□□□ 0.37
Hmx3P42581 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmx3P42581 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmx3P42581 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmx3P42581 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.33■□□□□ 0.37
Hmx3P42581 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmx3P42581 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.33■□□□□ 0.36
Hmx3P42581 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Hmx3P42581 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.33■□□□□ 0.36
Hmx3P42581 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmx3P42581 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmx3P42581 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms