Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.72■□□□□ 0.75
Sftpa1P35242 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sftpa1P35242 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sftpa1P35242 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sftpa1P35242 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sftpa1P35242 Gm6139-201ENSMUST00000079261 882 ntBASIC19.72■□□□□ 0.75
Sftpa1P35242 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.71■□□□□ 0.75
Sftpa1P35242 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sftpa1P35242 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Sftpa1P35242 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sftpa1P35242 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.71■□□□□ 0.75
Sftpa1P35242 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sftpa1P35242 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sftpa1P35242 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Sftpa1P35242 Gm29257-201ENSMUST00000186115 639 ntBASIC19.7■□□□□ 0.74
Sftpa1P35242 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.7■□□□□ 0.74
Sftpa1P35242 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sftpa1P35242 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sftpa1P35242 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sftpa1P35242 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sftpa1P35242 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.69■□□□□ 0.74
Sftpa1P35242 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Sftpa1P35242 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Sftpa1P35242 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sftpa1P35242 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sftpa1P35242 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sftpa1P35242 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sftpa1P35242 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sftpa1P35242 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sftpa1P35242 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sftpa1P35242 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sftpa1P35242 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Sftpa1P35242 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.68■□□□□ 0.74
Sftpa1P35242 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sftpa1P35242 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.68■□□□□ 0.74
Sftpa1P35242 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sftpa1P35242 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sftpa1P35242 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.67■□□□□ 0.74
Sftpa1P35242 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sftpa1P35242 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sftpa1P35242 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sftpa1P35242 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sftpa1P35242 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sftpa1P35242 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sftpa1P35242 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sftpa1P35242 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sftpa1P35242 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sftpa1P35242 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sftpa1P35242 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sftpa1P35242 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sftpa1P35242 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sftpa1P35242 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sftpa1P35242 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sftpa1P35242 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sftpa1P35242 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sftpa1P35242 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.66■□□□□ 0.74
Sftpa1P35242 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sftpa1P35242 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sftpa1P35242 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sftpa1P35242 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sftpa1P35242 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sftpa1P35242 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Sftpa1P35242 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Sftpa1P35242 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Sftpa1P35242 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Sftpa1P35242 Gm43137-201ENSMUST00000198052 594 ntBASIC19.64■□□□□ 0.73
Sftpa1P35242 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sftpa1P35242 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sftpa1P35242 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sftpa1P35242 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sftpa1P35242 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sftpa1P35242 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sftpa1P35242 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sftpa1P35242 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sftpa1P35242 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sftpa1P35242 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sftpa1P35242 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sftpa1P35242 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sftpa1P35242 Gm43017-201ENSMUST00000198296 752 ntBASIC19.63■□□□□ 0.73
Sftpa1P35242 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sftpa1P35242 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sftpa1P35242 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.63■□□□□ 0.73
Sftpa1P35242 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sftpa1P35242 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sftpa1P35242 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sftpa1P35242 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Sftpa1P35242 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.61■□□□□ 0.73
Sftpa1P35242 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sftpa1P35242 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.61■□□□□ 0.73
Sftpa1P35242 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.61■□□□□ 0.73
Sftpa1P35242 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Sftpa1P35242 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
Sftpa1P35242 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.61■□□□□ 0.73
Sftpa1P35242 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sftpa1P35242 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sftpa1P35242 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sftpa1P35242 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sftpa1P35242 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Sftpa1P35242 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.6■□□□□ 0.73
Sftpa1P35242 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms