Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1aP25118 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.7■□□□□ 0.42
Tnfrsf1aP25118 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1aP25118 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1aP25118 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1aP25118 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1aP25118 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1aP25118 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1aP25118 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.69■□□□□ 0.42
Tnfrsf1aP25118 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1aP25118 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1aP25118 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1aP25118 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1aP25118 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1aP25118 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1aP25118 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tnfrsf1aP25118 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1aP25118 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Tnfrsf1aP25118 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf1aP25118 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1aP25118 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1aP25118 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1aP25118 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1aP25118 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1aP25118 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1aP25118 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.67■□□□□ 0.42
Tnfrsf1aP25118 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1aP25118 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.67■□□□□ 0.42
Tnfrsf1aP25118 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1aP25118 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1aP25118 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1aP25118 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1aP25118 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1aP25118 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1aP25118 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1aP25118 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Tnfrsf1aP25118 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1aP25118 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1aP25118 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Gm12366-201ENSMUST00000121722 873 ntBASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Gm5786-201ENSMUST00000085368 882 ntBASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf1aP25118 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tnfrsf1aP25118 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tnfrsf1aP25118 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1aP25118 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1aP25118 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1aP25118 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf1aP25118 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf1aP25118 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.63■□□□□ 0.41
Tnfrsf1aP25118 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf1aP25118 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf1aP25118 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tnfrsf1aP25118 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.62■□□□□ 0.41
Tnfrsf1aP25118 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1aP25118 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.62■□□□□ 0.41
Tnfrsf1aP25118 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1aP25118 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.62■□□□□ 0.41
Tnfrsf1aP25118 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf1aP25118 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.62■□□□□ 0.41
Tnfrsf1aP25118 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1aP25118 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf1aP25118 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Tnfrsf1aP25118 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1aP25118 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1aP25118 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1aP25118 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1aP25118 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.6■□□□□ 0.41
Tnfrsf1aP25118 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1aP25118 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1aP25118 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1aP25118 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms