Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 C9orf163-202ENST00000624034 2573 ntBASIC22.53■■□□□ 1.2
LINGO3P0C6S8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
LINGO3P0C6S8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.52■■□□□ 1.2
LINGO3P0C6S8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LINGO3P0C6S8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LINGO3P0C6S8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
LINGO3P0C6S8 AL359258.2-201ENST00000564063 1566 ntBASIC22.52■■□□□ 1.2
LINGO3P0C6S8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.52■■□□□ 1.2
LINGO3P0C6S8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LINGO3P0C6S8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.52■■□□□ 1.2
LINGO3P0C6S8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LINGO3P0C6S8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.51■■□□□ 1.19
LINGO3P0C6S8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
LINGO3P0C6S8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.51■■□□□ 1.19
LINGO3P0C6S8 LINC01124-201ENST00000409786 2117 ntBASIC22.51■■□□□ 1.19
LINGO3P0C6S8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.51■■□□□ 1.19
LINGO3P0C6S8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.5■■□□□ 1.19
LINGO3P0C6S8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LINGO3P0C6S8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LINGO3P0C6S8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
LINGO3P0C6S8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.5■■□□□ 1.19
LINGO3P0C6S8 C1orf229-201ENST00000623686 2258 ntBASIC22.5■■□□□ 1.19
LINGO3P0C6S8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.5■■□□□ 1.19
LINGO3P0C6S8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LINGO3P0C6S8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LINGO3P0C6S8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LINGO3P0C6S8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LINGO3P0C6S8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LINGO3P0C6S8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LINGO3P0C6S8 AC126177.7-201ENST00000547904 679 ntBASIC22.49■■□□□ 1.19
LINGO3P0C6S8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LINGO3P0C6S8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LINGO3P0C6S8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.49■■□□□ 1.19
LINGO3P0C6S8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LINGO3P0C6S8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LINGO3P0C6S8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LINGO3P0C6S8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.48■■□□□ 1.19
LINGO3P0C6S8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LINGO3P0C6S8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
LINGO3P0C6S8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LINGO3P0C6S8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LINGO3P0C6S8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LINGO3P0C6S8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.47■■□□□ 1.19
LINGO3P0C6S8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.47■■□□□ 1.19
LINGO3P0C6S8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
LINGO3P0C6S8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.47■■□□□ 1.19
LINGO3P0C6S8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.47■■□□□ 1.19
LINGO3P0C6S8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
LINGO3P0C6S8 EP400NL-214ENST00000641289 2402 ntBASIC22.47■■□□□ 1.19
LINGO3P0C6S8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
LINGO3P0C6S8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LINGO3P0C6S8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LINGO3P0C6S8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LINGO3P0C6S8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
LINGO3P0C6S8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
LINGO3P0C6S8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LINGO3P0C6S8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
LINGO3P0C6S8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
LINGO3P0C6S8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LINGO3P0C6S8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.45■■□□□ 1.18
LINGO3P0C6S8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LINGO3P0C6S8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
LINGO3P0C6S8 AC060814.1-201ENST00000554326 538 ntBASIC22.45■■□□□ 1.18
LINGO3P0C6S8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
LINGO3P0C6S8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.45■■□□□ 1.18
LINGO3P0C6S8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LINGO3P0C6S8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
LINGO3P0C6S8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
LINGO3P0C6S8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LINGO3P0C6S8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LINGO3P0C6S8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LINGO3P0C6S8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LINGO3P0C6S8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LINGO3P0C6S8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LINGO3P0C6S8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.44■■□□□ 1.18
LINGO3P0C6S8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.43■■□□□ 1.18
LINGO3P0C6S8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LINGO3P0C6S8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LINGO3P0C6S8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
LINGO3P0C6S8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.43■■□□□ 1.18
LINGO3P0C6S8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.42■■□□□ 1.18
LINGO3P0C6S8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.42■■□□□ 1.18
LINGO3P0C6S8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.42■■□□□ 1.18
LINGO3P0C6S8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
LINGO3P0C6S8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LINGO3P0C6S8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LINGO3P0C6S8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
LINGO3P0C6S8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LINGO3P0C6S8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
LINGO3P0C6S8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms