Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Rps24-207ENSMUST00000224568 714 ntBASIC19.68■□□□□ 0.74
Ctla4P09793 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Ctla4P09793 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctla4P09793 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctla4P09793 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ctla4P09793 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ctla4P09793 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctla4P09793 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctla4P09793 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctla4P09793 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.67■□□□□ 0.74
Ctla4P09793 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctla4P09793 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctla4P09793 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.67■□□□□ 0.74
Ctla4P09793 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.67■□□□□ 0.74
Ctla4P09793 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.67■□□□□ 0.74
Ctla4P09793 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.67■□□□□ 0.74
Ctla4P09793 Gm9959-201ENSMUST00000068277 390 ntBASIC19.67■□□□□ 0.74
Ctla4P09793 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ctla4P09793 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctla4P09793 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctla4P09793 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ctla4P09793 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctla4P09793 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ctla4P09793 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctla4P09793 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctla4P09793 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctla4P09793 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctla4P09793 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctla4P09793 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctla4P09793 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctla4P09793 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctla4P09793 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctla4P09793 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctla4P09793 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctla4P09793 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctla4P09793 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctla4P09793 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctla4P09793 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctla4P09793 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.65■□□□□ 0.74
Ctla4P09793 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.65■□□□□ 0.74
Ctla4P09793 Gm14117-201ENSMUST00000122417 843 ntBASIC19.64■□□□□ 0.73
Ctla4P09793 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctla4P09793 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctla4P09793 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctla4P09793 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctla4P09793 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctla4P09793 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctla4P09793 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Ctla4P09793 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.63■□□□□ 0.73
Ctla4P09793 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctla4P09793 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.63■□□□□ 0.73
Ctla4P09793 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctla4P09793 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.63■□□□□ 0.73
Ctla4P09793 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.63■□□□□ 0.73
Ctla4P09793 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.63■□□□□ 0.73
Ctla4P09793 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Ctla4P09793 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.62■□□□□ 0.73
Ctla4P09793 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ctla4P09793 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctla4P09793 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctla4P09793 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ctla4P09793 Etf1-202ENSMUST00000180351 108 ntBASIC19.62■□□□□ 0.73
Ctla4P09793 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.62■□□□□ 0.73
Ctla4P09793 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ctla4P09793 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctla4P09793 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ctla4P09793 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ctla4P09793 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctla4P09793 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctla4P09793 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ctla4P09793 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.61■□□□□ 0.73
Ctla4P09793 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctla4P09793 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.61■□□□□ 0.73
Ctla4P09793 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.61■□□□□ 0.73
Ctla4P09793 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ctla4P09793 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ctla4P09793 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctla4P09793 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.6■□□□□ 0.73
Ctla4P09793 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctla4P09793 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctla4P09793 Gm45102-201ENSMUST00000207427 857 ntBASIC19.6■□□□□ 0.73
Ctla4P09793 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.6■□□□□ 0.73
Ctla4P09793 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.6■□□□□ 0.73
Ctla4P09793 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctla4P09793 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ctla4P09793 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ctla4P09793 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctla4P09793 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctla4P09793 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctla4P09793 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctla4P09793 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ctla4P09793 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ctla4P09793 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.58■□□□□ 0.72
Ctla4P09793 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ctla4P09793 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ctla4P09793 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ctla4P09793 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.57■□□□□ 0.72
Ctla4P09793 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctla4P09793 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctla4P09793 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms