Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
MMP3P08254 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.33■■□□□ 1.81
MMP3P08254 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.33■■□□□ 1.81
MMP3P08254 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.33■■□□□ 1.8
MMP3P08254 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
MMP3P08254 AL136116.3-201ENST00000402907 1138 ntBASIC26.32■■□□□ 1.8
MMP3P08254 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
MMP3P08254 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.32■■□□□ 1.8
MMP3P08254 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MMP3P08254 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MMP3P08254 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
MMP3P08254 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
MMP3P08254 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
MMP3P08254 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MMP3P08254 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
MMP3P08254 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
MMP3P08254 AC097639.1-201ENST00000565519 1891 ntBASIC26.31■■□□□ 1.8
MMP3P08254 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.31■■□□□ 1.8
MMP3P08254 AC090877.2-201ENST00000558441 1738 ntBASIC26.31■■□□□ 1.8
MMP3P08254 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MMP3P08254 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
MMP3P08254 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
MMP3P08254 MIR638-201ENST00000385237 100 ntBASIC26.3■■□□□ 1.8
MMP3P08254 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
MMP3P08254 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
MMP3P08254 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.3■■□□□ 1.8
MMP3P08254 AL356740.2-201ENST00000601559 647 ntBASIC26.3■■□□□ 1.8
MMP3P08254 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
MMP3P08254 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MMP3P08254 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
MMP3P08254 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.29■■□□□ 1.8
MMP3P08254 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
MMP3P08254 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.29■■□□□ 1.8
MMP3P08254 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
MMP3P08254 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP3P08254 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
MMP3P08254 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.28■■□□□ 1.8
MMP3P08254 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
MMP3P08254 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
MMP3P08254 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.27■■□□□ 1.8
MMP3P08254 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
MMP3P08254 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.27■■□□□ 1.8
MMP3P08254 AL139246.5-201ENST00000606645 996 ntBASIC26.27■■□□□ 1.8
MMP3P08254 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.27■■□□□ 1.8
MMP3P08254 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.27■■□□□ 1.8
MMP3P08254 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.27■■□□□ 1.8
MMP3P08254 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.27■■□□□ 1.8
MMP3P08254 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
MMP3P08254 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MMP3P08254 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MMP3P08254 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MMP3P08254 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.26■■□□□ 1.79
MMP3P08254 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.26■■□□□ 1.79
MMP3P08254 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MMP3P08254 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MMP3P08254 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.25■■□□□ 1.79
MMP3P08254 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
MMP3P08254 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.25■■□□□ 1.79
MMP3P08254 MIR4466-201ENST00000606121 54 ntBASIC26.25■■□□□ 1.79
MMP3P08254 AC010501.1-201ENST00000606270 1962 ntBASIC26.25■■□□□ 1.79
MMP3P08254 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
MMP3P08254 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MMP3P08254 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
MMP3P08254 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.24■■□□□ 1.79
MMP3P08254 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MMP3P08254 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
MMP3P08254 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MMP3P08254 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
MMP3P08254 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
MMP3P08254 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
MMP3P08254 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MMP3P08254 AL512631.2-201ENST00000604634 923 ntBASIC26.23■■□□□ 1.79
MMP3P08254 SNX5-217ENST00000606557 1087 ntBASIC26.23■■□□□ 1.79
MMP3P08254 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.23■■□□□ 1.79
MMP3P08254 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MMP3P08254 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MMP3P08254 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
MMP3P08254 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.22■■□□□ 1.79
MMP3P08254 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
MMP3P08254 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
MMP3P08254 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
MMP3P08254 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MMP3P08254 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
MMP3P08254 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.21■■□□□ 1.79
MMP3P08254 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.21■■□□□ 1.79
MMP3P08254 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
MMP3P08254 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
MMP3P08254 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MMP3P08254 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MMP3P08254 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
MMP3P08254 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
MMP3P08254 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.2■■□□□ 1.79
MMP3P08254 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.2■■□□□ 1.78
MMP3P08254 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
MMP3P08254 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.2■■□□□ 1.78
MMP3P08254 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.2■■□□□ 1.78
MMP3P08254 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
MMP3P08254 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.19■■□□□ 1.78
MMP3P08254 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
MMP3P08254 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms