Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CNOT4O95628 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.78■□□□□ 0.92
CNOT4O95628 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT4O95628 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT4O95628 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.78■□□□□ 0.92
CNOT4O95628 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT4O95628 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT4O95628 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT4O95628 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT4O95628 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
CNOT4O95628 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT4O95628 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT4O95628 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
CNOT4O95628 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT4O95628 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT4O95628 GUSBP5-201ENST00000418136 578 ntBASIC20.77■□□□□ 0.92
CNOT4O95628 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.77■□□□□ 0.92
CNOT4O95628 AC120024.1-201ENST00000562672 995 ntBASIC20.77■□□□□ 0.92
CNOT4O95628 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT4O95628 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNOT4O95628 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT4O95628 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CNOT4O95628 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.76■□□□□ 0.91
CNOT4O95628 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
CNOT4O95628 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT4O95628 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT4O95628 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT4O95628 Z92544.1-202ENST00000571933 1220 ntBASIC20.75■□□□□ 0.91
CNOT4O95628 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT4O95628 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT4O95628 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CNOT4O95628 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CNOT4O95628 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT4O95628 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT4O95628 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.74■□□□□ 0.91
CNOT4O95628 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT4O95628 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT4O95628 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT4O95628 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.74■□□□□ 0.91
CNOT4O95628 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.74■□□□□ 0.91
CNOT4O95628 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT4O95628 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNOT4O95628 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CNOT4O95628 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.73■□□□□ 0.91
CNOT4O95628 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT4O95628 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT4O95628 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.73■□□□□ 0.91
CNOT4O95628 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.73■□□□□ 0.91
CNOT4O95628 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.73■□□□□ 0.91
CNOT4O95628 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT4O95628 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CNOT4O95628 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT4O95628 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.72■□□□□ 0.91
CNOT4O95628 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CNOT4O95628 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT4O95628 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT4O95628 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT4O95628 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.71■□□□□ 0.91
CNOT4O95628 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.71■□□□□ 0.91
CNOT4O95628 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT4O95628 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CNOT4O95628 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.71■□□□□ 0.91
CNOT4O95628 AC135731.1-201ENST00000569415 2548 ntBASIC20.71■□□□□ 0.91
CNOT4O95628 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT4O95628 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT4O95628 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.7■□□□□ 0.91
CNOT4O95628 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CNOT4O95628 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT4O95628 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT4O95628 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT4O95628 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT4O95628 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT4O95628 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT4O95628 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.7■□□□□ 0.9
CNOT4O95628 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT4O95628 AC137630.3-201ENST00000607245 391 ntBASIC20.7■□□□□ 0.9
CNOT4O95628 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CNOT4O95628 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT4O95628 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT4O95628 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT4O95628 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CNOT4O95628 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT4O95628 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT4O95628 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT4O95628 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT4O95628 BX664725.1-201ENST00000438252 379 ntBASIC20.69■□□□□ 0.9
CNOT4O95628 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT4O95628 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT4O95628 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT4O95628 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT4O95628 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT4O95628 AC090877.2-201ENST00000558441 1738 ntBASIC20.68■□□□□ 0.9
CNOT4O95628 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT4O95628 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT4O95628 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CNOT4O95628 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.68■□□□□ 0.9
CNOT4O95628 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT4O95628 MIR4281-201ENST00000580852 62 ntBASIC20.68■□□□□ 0.9
CNOT4O95628 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CNOT4O95628 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms