Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF13O75888 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFSF13O75888 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFSF13O75888 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFSF13O75888 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
TNFSF13O75888 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFSF13O75888 KRT16P3-201ENST00000439127 1283 ntBASIC20.79■□□□□ 0.92
TNFSF13O75888 TSPY9P-201ENST00000440215 945 ntBASIC20.79■□□□□ 0.92
TNFSF13O75888 TSPY11P-201ENST00000442607 1045 ntBASIC20.79■□□□□ 0.92
TNFSF13O75888 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFSF13O75888 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF13O75888 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFSF13O75888 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TNFSF13O75888 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF13O75888 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.78■□□□□ 0.92
TNFSF13O75888 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.78■□□□□ 0.92
TNFSF13O75888 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF13O75888 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TNFSF13O75888 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF13O75888 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF13O75888 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF13O75888 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF13O75888 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF13O75888 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.77■□□□□ 0.92
TNFSF13O75888 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TNFSF13O75888 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TNFSF13O75888 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.77■□□□□ 0.92
TNFSF13O75888 AC090877.2-201ENST00000558441 1738 ntBASIC20.77■□□□□ 0.92
TNFSF13O75888 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TNFSF13O75888 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF13O75888 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF13O75888 AF131216.4-201ENST00000638924 1588 ntBASIC20.76■□□□□ 0.91
TNFSF13O75888 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF13O75888 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TNFSF13O75888 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF13O75888 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFSF13O75888 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.76■□□□□ 0.91
TNFSF13O75888 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.76■□□□□ 0.91
TNFSF13O75888 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF13O75888 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF13O75888 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF13O75888 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFSF13O75888 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF13O75888 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TNFSF13O75888 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFSF13O75888 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF13O75888 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFSF13O75888 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF13O75888 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFSF13O75888 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFSF13O75888 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.74■□□□□ 0.91
TNFSF13O75888 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFSF13O75888 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF13O75888 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF13O75888 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFSF13O75888 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF13O75888 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFSF13O75888 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFSF13O75888 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TNFSF13O75888 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF13O75888 DUSP8P4-201ENST00000399538 1761 ntBASIC20.72■□□□□ 0.91
TNFSF13O75888 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF13O75888 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF13O75888 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFSF13O75888 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF13O75888 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.72■□□□□ 0.91
TNFSF13O75888 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
TNFSF13O75888 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFSF13O75888 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TNFSF13O75888 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF13O75888 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TNFSF13O75888 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.71■□□□□ 0.91
TNFSF13O75888 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFSF13O75888 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFSF13O75888 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF13O75888 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF13O75888 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TNFSF13O75888 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF13O75888 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFSF13O75888 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TNFSF13O75888 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF13O75888 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF13O75888 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.69■□□□□ 0.9
TNFSF13O75888 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.69■□□□□ 0.9
TNFSF13O75888 AC010997.5-201ENST00000609182 354 ntBASIC20.69■□□□□ 0.9
TNFSF13O75888 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.69■□□□□ 0.9
TNFSF13O75888 AC091060.1-201ENST00000623524 1766 ntBASIC20.69■□□□□ 0.9
TNFSF13O75888 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.68■□□□□ 0.9
TNFSF13O75888 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF13O75888 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF13O75888 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF13O75888 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.68■□□□□ 0.9
TNFSF13O75888 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF13O75888 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF13O75888 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF13O75888 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF13O75888 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNFSF13O75888 MTDHP2-201ENST00000601468 714 ntBASIC20.67■□□□□ 0.9
TNFSF13O75888 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFSF13O75888 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms