Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.18■□□□□ 0.98
PTP4A3O75365 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTP4A3O75365 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTP4A3O75365 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTP4A3O75365 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PTP4A3O75365 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.18■□□□□ 0.98
PTP4A3O75365 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.18■□□□□ 0.98
PTP4A3O75365 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTP4A3O75365 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTP4A3O75365 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.17■□□□□ 0.98
PTP4A3O75365 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTP4A3O75365 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTP4A3O75365 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTP4A3O75365 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.16■□□□□ 0.98
PTP4A3O75365 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTP4A3O75365 FOXO3B-201ENST00000395675 1928 ntBASIC21.16■□□□□ 0.98
PTP4A3O75365 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTP4A3O75365 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.15■□□□□ 0.98
PTP4A3O75365 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTP4A3O75365 AC004812.2-201ENST00000611079 2094 ntBASIC21.15■□□□□ 0.98
PTP4A3O75365 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.15■□□□□ 0.98
PTP4A3O75365 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTP4A3O75365 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTP4A3O75365 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTP4A3O75365 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTP4A3O75365 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTP4A3O75365 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTP4A3O75365 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTP4A3O75365 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTP4A3O75365 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTP4A3O75365 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A3O75365 HLA-L-211ENST00000482052 1765 ntBASIC21.13■□□□□ 0.97
PTP4A3O75365 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A3O75365 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A3O75365 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.13■□□□□ 0.97
PTP4A3O75365 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A3O75365 AC009831.1-201ENST00000580420 1582 ntBASIC21.13■□□□□ 0.97
PTP4A3O75365 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PTP4A3O75365 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A3O75365 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A3O75365 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A3O75365 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.12■□□□□ 0.97
PTP4A3O75365 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A3O75365 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A3O75365 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A3O75365 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PTP4A3O75365 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.12■□□□□ 0.97
PTP4A3O75365 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A3O75365 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A3O75365 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A3O75365 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.12■□□□□ 0.97
PTP4A3O75365 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A3O75365 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.12■□□□□ 0.97
PTP4A3O75365 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTP4A3O75365 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PTP4A3O75365 AC133552.2-201ENST00000619106 1032 ntBASIC21.11■□□□□ 0.97
PTP4A3O75365 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTP4A3O75365 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTP4A3O75365 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTP4A3O75365 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTP4A3O75365 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTP4A3O75365 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PTP4A3O75365 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.1■□□□□ 0.97
PTP4A3O75365 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PTP4A3O75365 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTP4A3O75365 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTP4A3O75365 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTP4A3O75365 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.1■□□□□ 0.97
PTP4A3O75365 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTP4A3O75365 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.1■□□□□ 0.97
PTP4A3O75365 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.1■□□□□ 0.97
PTP4A3O75365 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTP4A3O75365 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A3O75365 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A3O75365 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A3O75365 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A3O75365 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A3O75365 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PTP4A3O75365 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.09■□□□□ 0.97
PTP4A3O75365 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A3O75365 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A3O75365 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A3O75365 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PTP4A3O75365 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
PTP4A3O75365 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PTP4A3O75365 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PTP4A3O75365 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.08■□□□□ 0.97
PTP4A3O75365 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTP4A3O75365 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTP4A3O75365 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTP4A3O75365 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.08■□□□□ 0.97
PTP4A3O75365 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PTP4A3O75365 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A3O75365 RNF126P1-201ENST00000567452 1320 ntBASIC21.07■□□□□ 0.96
PTP4A3O75365 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A3O75365 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A3O75365 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A3O75365 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A3O75365 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A3O75365 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms