Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TSPAN1O60635 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TSPAN1O60635 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.71■■□□□ 1.71
TSPAN1O60635 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
TSPAN1O60635 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
TSPAN1O60635 UNC93B8-201ENST00000511903 705 ntBASIC25.7■■□□□ 1.7
TSPAN1O60635 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.7■■□□□ 1.7
TSPAN1O60635 AC090877.2-201ENST00000558441 1738 ntBASIC25.7■■□□□ 1.7
TSPAN1O60635 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TSPAN1O60635 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TSPAN1O60635 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.69■■□□□ 1.7
TSPAN1O60635 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TSPAN1O60635 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
TSPAN1O60635 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
TSPAN1O60635 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.69■■□□□ 1.7
TSPAN1O60635 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TSPAN1O60635 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.68■■□□□ 1.7
TSPAN1O60635 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TSPAN1O60635 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.67■■□□□ 1.7
TSPAN1O60635 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.67■■□□□ 1.7
TSPAN1O60635 AC131212.1-201ENST00000613771 668 ntBASIC25.67■■□□□ 1.7
TSPAN1O60635 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
TSPAN1O60635 AF131216.4-201ENST00000638924 1588 ntBASIC25.67■■□□□ 1.7
TSPAN1O60635 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TSPAN1O60635 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TSPAN1O60635 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
TSPAN1O60635 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TSPAN1O60635 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.66■■□□□ 1.7
TSPAN1O60635 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.66■■□□□ 1.7
TSPAN1O60635 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
TSPAN1O60635 AC092028.1-203ENST00000608262 953 ntBASIC25.66■■□□□ 1.7
TSPAN1O60635 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TSPAN1O60635 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
TSPAN1O60635 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TSPAN1O60635 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.65■■□□□ 1.7
TSPAN1O60635 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TSPAN1O60635 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.65■■□□□ 1.7
TSPAN1O60635 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.65■■□□□ 1.7
TSPAN1O60635 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.65■■□□□ 1.7
TSPAN1O60635 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TSPAN1O60635 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TSPAN1O60635 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TSPAN1O60635 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
TSPAN1O60635 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.64■■□□□ 1.7
TSPAN1O60635 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.64■■□□□ 1.7
TSPAN1O60635 TSPY9P-201ENST00000440215 945 ntBASIC25.64■■□□□ 1.7
TSPAN1O60635 TSPY11P-201ENST00000442607 1045 ntBASIC25.64■■□□□ 1.7
TSPAN1O60635 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.64■■□□□ 1.7
TSPAN1O60635 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.64■■□□□ 1.7
TSPAN1O60635 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.64■■□□□ 1.69
TSPAN1O60635 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.63■■□□□ 1.69
TSPAN1O60635 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.63■■□□□ 1.69
TSPAN1O60635 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.63■■□□□ 1.69
TSPAN1O60635 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TSPAN1O60635 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TSPAN1O60635 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.62■■□□□ 1.69
TSPAN1O60635 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.62■■□□□ 1.69
TSPAN1O60635 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.61■■□□□ 1.69
TSPAN1O60635 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TSPAN1O60635 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TSPAN1O60635 SLC6A10P-202ENST00000431994 2058 ntBASIC25.61■■□□□ 1.69
TSPAN1O60635 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.61■■□□□ 1.69
TSPAN1O60635 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.61■■□□□ 1.69
TSPAN1O60635 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.61■■□□□ 1.69
TSPAN1O60635 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
TSPAN1O60635 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.6■■□□□ 1.69
TSPAN1O60635 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TSPAN1O60635 KRT16P3-201ENST00000439127 1283 ntBASIC25.6■■□□□ 1.69
TSPAN1O60635 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.6■■□□□ 1.69
TSPAN1O60635 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
TSPAN1O60635 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.6■■□□□ 1.69
TSPAN1O60635 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.6■■□□□ 1.69
TSPAN1O60635 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
TSPAN1O60635 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.59■■□□□ 1.69
TSPAN1O60635 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TSPAN1O60635 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.59■■□□□ 1.69
TSPAN1O60635 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
TSPAN1O60635 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
TSPAN1O60635 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.59■■□□□ 1.69
TSPAN1O60635 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.59■■□□□ 1.69
TSPAN1O60635 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TSPAN1O60635 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TSPAN1O60635 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TSPAN1O60635 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.58■■□□□ 1.69
TSPAN1O60635 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
TSPAN1O60635 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TSPAN1O60635 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
TSPAN1O60635 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TSPAN1O60635 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.57■■□□□ 1.68
TSPAN1O60635 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TSPAN1O60635 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.57■■□□□ 1.68
TSPAN1O60635 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TSPAN1O60635 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
TSPAN1O60635 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.56■■□□□ 1.68
TSPAN1O60635 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TSPAN1O60635 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TSPAN1O60635 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
TSPAN1O60635 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
TSPAN1O60635 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TSPAN1O60635 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms