Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZIC3O60481 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ZIC3O60481 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.25■□□□□ 0.99
ZIC3O60481 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ZIC3O60481 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.25■□□□□ 0.99
ZIC3O60481 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZIC3O60481 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.25■□□□□ 0.99
ZIC3O60481 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZIC3O60481 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZIC3O60481 AC090877.2-201ENST00000558441 1738 ntBASIC21.24■□□□□ 0.99
ZIC3O60481 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZIC3O60481 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.24■□□□□ 0.99
ZIC3O60481 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.24■□□□□ 0.99
ZIC3O60481 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZIC3O60481 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZIC3O60481 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZIC3O60481 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.23■□□□□ 0.99
ZIC3O60481 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.23■□□□□ 0.99
ZIC3O60481 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.23■□□□□ 0.99
ZIC3O60481 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZIC3O60481 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZIC3O60481 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZIC3O60481 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZIC3O60481 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZIC3O60481 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZIC3O60481 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.22■□□□□ 0.99
ZIC3O60481 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.22■□□□□ 0.99
ZIC3O60481 MIR4281-201ENST00000580852 62 ntBASIC21.22■□□□□ 0.99
ZIC3O60481 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZIC3O60481 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZIC3O60481 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZIC3O60481 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ZIC3O60481 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ZIC3O60481 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.21■□□□□ 0.99
ZIC3O60481 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZIC3O60481 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ZIC3O60481 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZIC3O60481 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZIC3O60481 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
ZIC3O60481 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.2■□□□□ 0.98
ZIC3O60481 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ZIC3O60481 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZIC3O60481 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZIC3O60481 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZIC3O60481 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZIC3O60481 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.19■□□□□ 0.98
ZIC3O60481 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.19■□□□□ 0.98
ZIC3O60481 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZIC3O60481 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ZIC3O60481 AC137630.3-201ENST00000607245 391 ntBASIC21.19■□□□□ 0.98
ZIC3O60481 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZIC3O60481 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ZIC3O60481 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZIC3O60481 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZIC3O60481 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZIC3O60481 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZIC3O60481 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZIC3O60481 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.18■□□□□ 0.98
ZIC3O60481 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.18■□□□□ 0.98
ZIC3O60481 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.18■□□□□ 0.98
ZIC3O60481 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZIC3O60481 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.18■□□□□ 0.98
ZIC3O60481 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ZIC3O60481 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZIC3O60481 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZIC3O60481 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZIC3O60481 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZIC3O60481 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZIC3O60481 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZIC3O60481 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ZIC3O60481 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ZIC3O60481 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ZIC3O60481 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZIC3O60481 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZIC3O60481 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ZIC3O60481 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.17■□□□□ 0.98
ZIC3O60481 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZIC3O60481 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
ZIC3O60481 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ZIC3O60481 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.16■□□□□ 0.98
ZIC3O60481 AC239859.2-201ENST00000444165 318 ntBASIC21.16■□□□□ 0.98
ZIC3O60481 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZIC3O60481 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZIC3O60481 Z92544.1-202ENST00000571933 1220 ntBASIC21.16■□□□□ 0.98
ZIC3O60481 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZIC3O60481 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.16■□□□□ 0.98
ZIC3O60481 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZIC3O60481 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZIC3O60481 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.16■□□□□ 0.98
ZIC3O60481 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ZIC3O60481 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZIC3O60481 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZIC3O60481 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.15■□□□□ 0.98
ZIC3O60481 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZIC3O60481 AC022211.4-201ENST00000625094 2161 ntBASIC21.15■□□□□ 0.98
ZIC3O60481 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZIC3O60481 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.15■□□□□ 0.98
ZIC3O60481 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.15■□□□□ 0.98
ZIC3O60481 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.15■□□□□ 0.98
ZIC3O60481 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms