Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dkk1O54908 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dkk1O54908 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Dkk1O54908 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dkk1O54908 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Dkk1O54908 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dkk1O54908 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Dkk1O54908 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dkk1O54908 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Dkk1O54908 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dkk1O54908 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Dkk1O54908 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dkk1O54908 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dkk1O54908 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.27■□□□□ 0.52
Dkk1O54908 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dkk1O54908 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.27■□□□□ 0.52
Dkk1O54908 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.27■□□□□ 0.52
Dkk1O54908 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dkk1O54908 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dkk1O54908 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Dkk1O54908 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dkk1O54908 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dkk1O54908 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dkk1O54908 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.26■□□□□ 0.51
Dkk1O54908 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dkk1O54908 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dkk1O54908 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dkk1O54908 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dkk1O54908 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Dkk1O54908 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dkk1O54908 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dkk1O54908 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dkk1O54908 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dkk1O54908 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.25■□□□□ 0.51
Dkk1O54908 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dkk1O54908 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.25■□□□□ 0.51
Dkk1O54908 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dkk1O54908 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.25■□□□□ 0.51
Dkk1O54908 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dkk1O54908 Gm5812-201ENSMUST00000061073 957 ntBASIC18.25■□□□□ 0.51
Dkk1O54908 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Dkk1O54908 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.25■□□□□ 0.51
Dkk1O54908 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dkk1O54908 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dkk1O54908 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.25■□□□□ 0.51
Dkk1O54908 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Dkk1O54908 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC18.24■□□□□ 0.51
Dkk1O54908 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dkk1O54908 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Dkk1O54908 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dkk1O54908 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dkk1O54908 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dkk1O54908 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.23■□□□□ 0.51
Dkk1O54908 Gm37720-201ENSMUST00000195497 1241 ntBASIC18.23■□□□□ 0.51
Dkk1O54908 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dkk1O54908 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dkk1O54908 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dkk1O54908 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dkk1O54908 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dkk1O54908 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dkk1O54908 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.22■□□□□ 0.51
Dkk1O54908 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
Dkk1O54908 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.22■□□□□ 0.51
Dkk1O54908 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Dkk1O54908 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Dkk1O54908 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.22■□□□□ 0.51
Dkk1O54908 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dkk1O54908 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.22■□□□□ 0.51
Dkk1O54908 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dkk1O54908 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dkk1O54908 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Dkk1O54908 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dkk1O54908 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dkk1O54908 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Dkk1O54908 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Dkk1O54908 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Dkk1O54908 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.21■□□□□ 0.51
Dkk1O54908 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Dkk1O54908 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.21■□□□□ 0.51
Dkk1O54908 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dkk1O54908 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dkk1O54908 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.21■□□□□ 0.51
Dkk1O54908 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Dkk1O54908 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Dkk1O54908 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.2■□□□□ 0.5
Dkk1O54908 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Dkk1O54908 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Dkk1O54908 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dkk1O54908 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Dkk1O54908 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Dkk1O54908 Gm12106-201ENSMUST00000116006 1200 ntBASIC18.19■□□□□ 0.5
Dkk1O54908 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dkk1O54908 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC18.19■□□□□ 0.5
Dkk1O54908 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.19■□□□□ 0.5
Dkk1O54908 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dkk1O54908 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Dkk1O54908 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.19■□□□□ 0.5
Dkk1O54908 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dkk1O54908 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dkk1O54908 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms