Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2jO08740 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2jO08740 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2jO08740 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2jO08740 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2jO08740 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Polr2jO08740 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2jO08740 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2jO08740 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Polr2jO08740 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2jO08740 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Polr2jO08740 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2jO08740 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2jO08740 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2jO08740 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2jO08740 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2jO08740 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.27■□□□□ 0.84
Polr2jO08740 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2jO08740 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2jO08740 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2jO08740 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2jO08740 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr2jO08740 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr2jO08740 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr2jO08740 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.26■□□□□ 0.83
Polr2jO08740 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr2jO08740 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.26■□□□□ 0.83
Polr2jO08740 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr2jO08740 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr2jO08740 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr2jO08740 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr2jO08740 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr2jO08740 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr2jO08740 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr2jO08740 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Polr2jO08740 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr2jO08740 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr2jO08740 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Polr2jO08740 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Polr2jO08740 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Polr2jO08740 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr2jO08740 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr2jO08740 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr2jO08740 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr2jO08740 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.24■□□□□ 0.83
Polr2jO08740 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.24■□□□□ 0.83
Polr2jO08740 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.24■□□□□ 0.83
Polr2jO08740 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.24■□□□□ 0.83
Polr2jO08740 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr2jO08740 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr2jO08740 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Polr2jO08740 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Polr2jO08740 Gm11687-201ENSMUST00000118911 886 ntBASIC20.23■□□□□ 0.83
Polr2jO08740 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.23■□□□□ 0.83
Polr2jO08740 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.23■□□□□ 0.83
Polr2jO08740 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Polr2jO08740 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Polr2jO08740 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.23■□□□□ 0.83
Polr2jO08740 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Polr2jO08740 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr2jO08740 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Polr2jO08740 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr2jO08740 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr2jO08740 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr2jO08740 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr2jO08740 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.21■□□□□ 0.83
Polr2jO08740 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Polr2jO08740 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr2jO08740 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr2jO08740 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Polr2jO08740 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.2■□□□□ 0.83
Polr2jO08740 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2jO08740 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2jO08740 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Polr2jO08740 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2jO08740 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Polr2jO08740 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2jO08740 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2jO08740 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2jO08740 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2jO08740 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2jO08740 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2jO08740 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Polr2jO08740 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2jO08740 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2jO08740 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2jO08740 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2jO08740 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2jO08740 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2jO08740 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2jO08740 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2jO08740 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2jO08740 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2jO08740 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2jO08740 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Polr2jO08740 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2jO08740 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2jO08740 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2jO08740 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2jO08740 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms