Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Gm12366-201ENSMUST00000121722 873 ntBASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Gm5786-201ENSMUST00000085368 882 ntBASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdh9F8VPK8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh9F8VPK8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh9F8VPK8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdh9F8VPK8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh9F8VPK8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh9F8VPK8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh9F8VPK8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh9F8VPK8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh9F8VPK8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh9F8VPK8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh9F8VPK8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh9F8VPK8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh9F8VPK8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh9F8VPK8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Gm7332-201ENSMUST00000118351 454 ntBASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh9F8VPK8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.68■■□□□ 1.06
Pcdh9F8VPK8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh9F8VPK8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh9F8VPK8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh9F8VPK8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh9F8VPK8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh9F8VPK8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.66■■□□□ 1.06
Pcdh9F8VPK8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.66■■□□□ 1.06
Pcdh9F8VPK8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh9F8VPK8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh9F8VPK8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh9F8VPK8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh9F8VPK8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh9F8VPK8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdh9F8VPK8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh9F8VPK8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh9F8VPK8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh9F8VPK8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh9F8VPK8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Pcdh9F8VPK8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdh9F8VPK8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Pcdh9F8VPK8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdh9F8VPK8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh9F8VPK8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh9F8VPK8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh9F8VPK8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Pcdh9F8VPK8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh9F8VPK8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.64■■□□□ 1.05
Pcdh9F8VPK8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.64■■□□□ 1.05
Pcdh9F8VPK8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.63■■□□□ 1.05
Pcdh9F8VPK8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdh9F8VPK8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.63■■□□□ 1.05
Pcdh9F8VPK8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdh9F8VPK8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdh9F8VPK8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh9F8VPK8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.62■■□□□ 1.05
Pcdh9F8VPK8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh9F8VPK8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh9F8VPK8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdh9F8VPK8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdh9F8VPK8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh9F8VPK8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdh9F8VPK8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh9F8VPK8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh9F8VPK8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh9F8VPK8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh9F8VPK8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdh9F8VPK8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.61■■□□□ 1.05
Pcdh9F8VPK8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdh9F8VPK8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh9F8VPK8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms