Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4lE9Q2N0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cpsf4lE9Q2N0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4lE9Q2N0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4lE9Q2N0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4lE9Q2N0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Cpsf4lE9Q2N0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4lE9Q2N0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4lE9Q2N0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.99■□□□□ 0.47
Cpsf4lE9Q2N0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4lE9Q2N0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.99■□□□□ 0.47
Cpsf4lE9Q2N0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.99■□□□□ 0.47
Cpsf4lE9Q2N0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cpsf4lE9Q2N0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.99■□□□□ 0.47
Cpsf4lE9Q2N0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4lE9Q2N0 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.99■□□□□ 0.47
Cpsf4lE9Q2N0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.98■□□□□ 0.47
Cpsf4lE9Q2N0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4lE9Q2N0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4lE9Q2N0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4lE9Q2N0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4lE9Q2N0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cpsf4lE9Q2N0 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.98■□□□□ 0.47
Cpsf4lE9Q2N0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cpsf4lE9Q2N0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cpsf4lE9Q2N0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4lE9Q2N0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4lE9Q2N0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4lE9Q2N0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cpsf4lE9Q2N0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cpsf4lE9Q2N0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4lE9Q2N0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4lE9Q2N0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4lE9Q2N0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4lE9Q2N0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4lE9Q2N0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4lE9Q2N0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cpsf4lE9Q2N0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf4lE9Q2N0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf4lE9Q2N0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf4lE9Q2N0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Cpsf4lE9Q2N0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf4lE9Q2N0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Cpsf4lE9Q2N0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cpsf4lE9Q2N0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4lE9Q2N0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cpsf4lE9Q2N0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4lE9Q2N0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4lE9Q2N0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.93■□□□□ 0.46
Cpsf4lE9Q2N0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4lE9Q2N0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf4lE9Q2N0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4lE9Q2N0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf4lE9Q2N0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf4lE9Q2N0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.92■□□□□ 0.46
Cpsf4lE9Q2N0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4lE9Q2N0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4lE9Q2N0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cpsf4lE9Q2N0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.91■□□□□ 0.46
Cpsf4lE9Q2N0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.91■□□□□ 0.46
Cpsf4lE9Q2N0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cpsf4lE9Q2N0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4lE9Q2N0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4lE9Q2N0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4lE9Q2N0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Cpsf4lE9Q2N0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf4lE9Q2N0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cpsf4lE9Q2N0 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.9■□□□□ 0.46
Cpsf4lE9Q2N0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf4lE9Q2N0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf4lE9Q2N0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf4lE9Q2N0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf4lE9Q2N0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cpsf4lE9Q2N0 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.89■□□□□ 0.45
Cpsf4lE9Q2N0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4lE9Q2N0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4lE9Q2N0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4lE9Q2N0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4lE9Q2N0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4lE9Q2N0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms