Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh17E9PXF0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh17E9PXF0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh17E9PXF0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdh17E9PXF0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh17E9PXF0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdh17E9PXF0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh17E9PXF0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh17E9PXF0 Gm10399-202ENSMUST00000202768 748 ntBASIC19.66■□□□□ 0.74
Pcdh17E9PXF0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh17E9PXF0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdh17E9PXF0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdh17E9PXF0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdh17E9PXF0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh17E9PXF0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdh17E9PXF0 Gm22238-201ENSMUST00000175222 88 ntBASIC19.65■□□□□ 0.74
Pcdh17E9PXF0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdh17E9PXF0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh17E9PXF0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh17E9PXF0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh17E9PXF0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh17E9PXF0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdh17E9PXF0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh17E9PXF0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh17E9PXF0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh17E9PXF0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdh17E9PXF0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.64■□□□□ 0.73
Pcdh17E9PXF0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh17E9PXF0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh17E9PXF0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh17E9PXF0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh17E9PXF0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh17E9PXF0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdh17E9PXF0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdh17E9PXF0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh17E9PXF0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh17E9PXF0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdh17E9PXF0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdh17E9PXF0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh17E9PXF0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh17E9PXF0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh17E9PXF0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcdh17E9PXF0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdh17E9PXF0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh17E9PXF0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh17E9PXF0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh17E9PXF0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdh17E9PXF0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdh17E9PXF0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh17E9PXF0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh17E9PXF0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdh17E9PXF0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdh17E9PXF0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh17E9PXF0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh17E9PXF0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh17E9PXF0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh17E9PXF0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.58■□□□□ 0.73
Pcdh17E9PXF0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh17E9PXF0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Pcdh17E9PXF0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh17E9PXF0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh17E9PXF0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh17E9PXF0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh17E9PXF0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh17E9PXF0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh17E9PXF0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh17E9PXF0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdh17E9PXF0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh17E9PXF0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh17E9PXF0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh17E9PXF0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh17E9PXF0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdh17E9PXF0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Pcdh17E9PXF0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh17E9PXF0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdh17E9PXF0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh17E9PXF0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdh17E9PXF0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh17E9PXF0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh17E9PXF0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Pcdh17E9PXF0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh17E9PXF0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh17E9PXF0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh17E9PXF0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdh17E9PXF0 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.55■□□□□ 0.72
Pcdh17E9PXF0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh17E9PXF0 Gm13241-201ENSMUST00000094493 780 ntBASIC19.55■□□□□ 0.72
Pcdh17E9PXF0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh17E9PXF0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms