Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Hfm1D3Z4R1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Hfm1D3Z4R1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
Hfm1D3Z4R1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Hfm1D3Z4R1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
Hfm1D3Z4R1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Hfm1D3Z4R1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Hfm1D3Z4R1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
Hfm1D3Z4R1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Hfm1D3Z4R1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Hfm1D3Z4R1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
Hfm1D3Z4R1 Gm43137-201ENSMUST00000198052 594 ntBASIC30.53■■■□□ 2.48
Hfm1D3Z4R1 Gm43017-201ENSMUST00000198296 752 ntBASIC30.53■■■□□ 2.48
Hfm1D3Z4R1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Hfm1D3Z4R1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Hfm1D3Z4R1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Hfm1D3Z4R1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Hfm1D3Z4R1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Hfm1D3Z4R1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC30.52■■■□□ 2.48
Hfm1D3Z4R1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC30.52■■■□□ 2.48
Hfm1D3Z4R1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Hfm1D3Z4R1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Hfm1D3Z4R1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Hfm1D3Z4R1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.47
Hfm1D3Z4R1 Gm9870-201ENSMUST00000063874 645 ntBASIC30.51■■■□□ 2.47
Hfm1D3Z4R1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Hfm1D3Z4R1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Hfm1D3Z4R1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
Hfm1D3Z4R1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Hfm1D3Z4R1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
Hfm1D3Z4R1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC30.5■■■□□ 2.47
Hfm1D3Z4R1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC30.5■■■□□ 2.47
Hfm1D3Z4R1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Hfm1D3Z4R1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Hfm1D3Z4R1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
Hfm1D3Z4R1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hfm1D3Z4R1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC30.49■■■□□ 2.47
Hfm1D3Z4R1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hfm1D3Z4R1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC30.49■■■□□ 2.47
Hfm1D3Z4R1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hfm1D3Z4R1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hfm1D3Z4R1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hfm1D3Z4R1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
Hfm1D3Z4R1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Hfm1D3Z4R1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Hfm1D3Z4R1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
Hfm1D3Z4R1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Hfm1D3Z4R1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Hfm1D3Z4R1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 Gm29257-201ENSMUST00000186115 639 ntBASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 AC164629.5-201ENSMUST00000220387 632 ntBASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Hfm1D3Z4R1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Hfm1D3Z4R1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Hfm1D3Z4R1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC30.45■■■□□ 2.47
Hfm1D3Z4R1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Hfm1D3Z4R1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC30.45■■■□□ 2.47
Hfm1D3Z4R1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC30.45■■■□□ 2.47
Hfm1D3Z4R1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Hfm1D3Z4R1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Hfm1D3Z4R1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Hfm1D3Z4R1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.45■■■□□ 2.46
Hfm1D3Z4R1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Hfm1D3Z4R1 Mir7075-201ENSMUST00000184187 82 ntBASIC30.44■■■□□ 2.46
Hfm1D3Z4R1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Hfm1D3Z4R1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Hfm1D3Z4R1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Hfm1D3Z4R1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Hfm1D3Z4R1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Hfm1D3Z4R1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC30.42■■■□□ 2.46
Hfm1D3Z4R1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC30.42■■■□□ 2.46
Hfm1D3Z4R1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC30.42■■■□□ 2.46
Hfm1D3Z4R1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC30.42■■■□□ 2.46
Hfm1D3Z4R1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
Hfm1D3Z4R1 Gm6934-201ENSMUST00000194780 1905 ntBASIC30.42■■■□□ 2.46
Hfm1D3Z4R1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Hfm1D3Z4R1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Hfm1D3Z4R1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC30.41■■■□□ 2.46
Hfm1D3Z4R1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Hfm1D3Z4R1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Hfm1D3Z4R1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Hfm1D3Z4R1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Hfm1D3Z4R1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Hfm1D3Z4R1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
Hfm1D3Z4R1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
Hfm1D3Z4R1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Hfm1D3Z4R1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Hfm1D3Z4R1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Hfm1D3Z4R1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Hfm1D3Z4R1 AC116713.1-201ENSMUST00000215074 430 ntBASIC30.39■■■□□ 2.46
Hfm1D3Z4R1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC30.39■■■□□ 2.46
Hfm1D3Z4R1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC30.39■■■□□ 2.45
Hfm1D3Z4R1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms