Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.32■□□□□ 0.84
Clip3B9EHT4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.32■□□□□ 0.84
Clip3B9EHT4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clip3B9EHT4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clip3B9EHT4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clip3B9EHT4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Clip3B9EHT4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Clip3B9EHT4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Clip3B9EHT4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clip3B9EHT4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Clip3B9EHT4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clip3B9EHT4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clip3B9EHT4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Clip3B9EHT4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Clip3B9EHT4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clip3B9EHT4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clip3B9EHT4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clip3B9EHT4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.3■□□□□ 0.84
Clip3B9EHT4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Clip3B9EHT4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clip3B9EHT4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clip3B9EHT4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip3B9EHT4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.29■□□□□ 0.84
Clip3B9EHT4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip3B9EHT4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.29■□□□□ 0.84
Clip3B9EHT4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Clip3B9EHT4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Clip3B9EHT4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip3B9EHT4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip3B9EHT4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip3B9EHT4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip3B9EHT4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.28■□□□□ 0.84
Clip3B9EHT4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clip3B9EHT4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip3B9EHT4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip3B9EHT4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip3B9EHT4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip3B9EHT4 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.27■□□□□ 0.84
Clip3B9EHT4 Gm14117-201ENSMUST00000122417 843 ntBASIC20.27■□□□□ 0.84
Clip3B9EHT4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.27■□□□□ 0.84
Clip3B9EHT4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip3B9EHT4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clip3B9EHT4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clip3B9EHT4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clip3B9EHT4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip3B9EHT4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.26■□□□□ 0.83
Clip3B9EHT4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip3B9EHT4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip3B9EHT4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Clip3B9EHT4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip3B9EHT4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip3B9EHT4 Gm9959-201ENSMUST00000068277 390 ntBASIC20.26■□□□□ 0.83
Clip3B9EHT4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clip3B9EHT4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Clip3B9EHT4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip3B9EHT4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.25■□□□□ 0.83
Clip3B9EHT4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.25■□□□□ 0.83
Clip3B9EHT4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Clip3B9EHT4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip3B9EHT4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip3B9EHT4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip3B9EHT4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip3B9EHT4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Clip3B9EHT4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Clip3B9EHT4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip3B9EHT4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip3B9EHT4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Clip3B9EHT4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip3B9EHT4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clip3B9EHT4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip3B9EHT4 Etf1-202ENSMUST00000180351 108 ntBASIC20.24■□□□□ 0.83
Clip3B9EHT4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip3B9EHT4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Clip3B9EHT4 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.23■□□□□ 0.83
Clip3B9EHT4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Clip3B9EHT4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Clip3B9EHT4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clip3B9EHT4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.23■□□□□ 0.83
Clip3B9EHT4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip3B9EHT4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Gm45102-201ENSMUST00000207427 857 ntBASIC20.22■□□□□ 0.83
Clip3B9EHT4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Clip3B9EHT4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Clip3B9EHT4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip3B9EHT4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.21■□□□□ 0.83
Clip3B9EHT4 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.21■□□□□ 0.83
Clip3B9EHT4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip3B9EHT4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms