Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv29A0A0G2LB96 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trbv29A0A0G2LB96 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv29A0A0G2LB96 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.58■□□□□ 0.4
Trbv29A0A0G2LB96 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv29A0A0G2LB96 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Trbv29A0A0G2LB96 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv29A0A0G2LB96 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv29A0A0G2LB96 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv29A0A0G2LB96 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trbv29A0A0G2LB96 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv29A0A0G2LB96 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv29A0A0G2LB96 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Scarna2-201ENSMUST00000157560 414 ntBASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Gm9806-201ENSMUST00000051080 552 ntBASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv29A0A0G2LB96 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv29A0A0G2LB96 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv29A0A0G2LB96 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv29A0A0G2LB96 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv29A0A0G2LB96 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv29A0A0G2LB96 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.55■□□□□ 0.4
Trbv29A0A0G2LB96 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv29A0A0G2LB96 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv29A0A0G2LB96 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Gm16437-201ENSMUST00000025669 507 ntBASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv29A0A0G2LB96 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trbv29A0A0G2LB96 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trbv29A0A0G2LB96 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv29A0A0G2LB96 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv29A0A0G2LB96 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv29A0A0G2LB96 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv29A0A0G2LB96 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv29A0A0G2LB96 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
Trbv29A0A0G2LB96 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv29A0A0G2LB96 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv29A0A0G2LB96 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.52■□□□□ 0.4
Trbv29A0A0G2LB96 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.52■□□□□ 0.4
Trbv29A0A0G2LB96 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.52■□□□□ 0.4
Trbv29A0A0G2LB96 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv29A0A0G2LB96 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv29A0A0G2LB96 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv29A0A0G2LB96 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.52■□□□□ 0.39
Trbv29A0A0G2LB96 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv29A0A0G2LB96 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv29A0A0G2LB96 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.51■□□□□ 0.39
Trbv29A0A0G2LB96 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv29A0A0G2LB96 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv29A0A0G2LB96 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.51■□□□□ 0.39
Trbv29A0A0G2LB96 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv29A0A0G2LB96 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv29A0A0G2LB96 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv29A0A0G2LB96 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trbv29A0A0G2LB96 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv29A0A0G2LB96 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv29A0A0G2LB96 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv29A0A0G2LB96 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.5■□□□□ 0.39
Trbv29A0A0G2LB96 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv29A0A0G2LB96 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv29A0A0G2LB96 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Trbv29A0A0G2LB96 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv29A0A0G2LB96 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.48■□□□□ 0.39
Trbv29A0A0G2LB96 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.48■□□□□ 0.39
Trbv29A0A0G2LB96 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Trbv29A0A0G2LB96 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv29A0A0G2LB96 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trbv29A0A0G2LB96 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv29A0A0G2LB96 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.48■□□□□ 0.39
Trbv29A0A0G2LB96 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.48■□□□□ 0.39
Trbv29A0A0G2LB96 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv29A0A0G2LB96 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Notumos-201ENSMUST00000151998 2659 ntBASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 709 ms