Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-4A0A0B4J1K2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-4A0A0B4J1K2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.89■□□□□ 0.13
Trav9-4A0A0B4J1K2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-4A0A0B4J1K2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-4A0A0B4J1K2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-4A0A0B4J1K2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-4A0A0B4J1K2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-4A0A0B4J1K2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-4A0A0B4J1K2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-4A0A0B4J1K2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-4A0A0B4J1K2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav9-4A0A0B4J1K2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav9-4A0A0B4J1K2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav9-4A0A0B4J1K2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-4A0A0B4J1K2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-4A0A0B4J1K2 Gm43566-201ENSMUST00000196851 808 ntBASIC15.87■□□□□ 0.13
Trav9-4A0A0B4J1K2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav9-4A0A0B4J1K2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-4A0A0B4J1K2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-4A0A0B4J1K2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-4A0A0B4J1K2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-4A0A0B4J1K2 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.87■□□□□ 0.13
Trav9-4A0A0B4J1K2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav9-4A0A0B4J1K2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-4A0A0B4J1K2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9-4A0A0B4J1K2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9-4A0A0B4J1K2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
Trav9-4A0A0B4J1K2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav9-4A0A0B4J1K2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav9-4A0A0B4J1K2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-4A0A0B4J1K2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-4A0A0B4J1K2 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.84■□□□□ 0.13
Trav9-4A0A0B4J1K2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.84■□□□□ 0.13
Trav9-4A0A0B4J1K2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-4A0A0B4J1K2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-4A0A0B4J1K2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav9-4A0A0B4J1K2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav9-4A0A0B4J1K2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav9-4A0A0B4J1K2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav9-4A0A0B4J1K2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav9-4A0A0B4J1K2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9-4A0A0B4J1K2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav9-4A0A0B4J1K2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav9-4A0A0B4J1K2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav9-4A0A0B4J1K2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9-4A0A0B4J1K2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav9-4A0A0B4J1K2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9-4A0A0B4J1K2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9-4A0A0B4J1K2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav9-4A0A0B4J1K2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav9-4A0A0B4J1K2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms